Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma09g01645 | ATGGAGCCTTCCTCGATCTCTCCACCGCCAGCTCCGCCTGCCACCGCCGTCCCCTTCCCCGCCGAACCCAACGACCACCTTCCACCACCCATTCCCGAACCACCTTCTAACCACCCACCCTACGCCGAGATGATATACACGGCAATCGAGGCGCTGAAGGAGAAAGACGGTTCTAGCAAGAGGGCAATAGCGAAGTATATTGAGCAAGTGTATACGCAGCTTCCACCGAATCACTCAGACTTGTTGACTCAGCACTTGAATCACTTGAAGAGTAGGGGATTGCTCCAAATGGTAAAAAAATCTTACGCCCTTCCTAGATCTGTGCCCGTGTCTGTTCCTGGACCTGCACCCACACAAGGGACATCAGCAGTGCCGGCTGCTGTTGTTGCCATCACGACGACTCCGAGGCCCAGAGGTCGGCCTCGCAAGGCCCAAAATCCAGTTCAGAACTCGCCTCTGCCTCAGGACACTGTCAACGTGCAGGTTCAGCAGAATGCCGAGCCGGTCTGGGCTGCGCTTGGGCTTGCAGACGAGCCCGTGCAAGCGGAAGGCAGTGGCAAGAAGCGAGGTCGTCCGAAGAAGAGTGGCATCTTAGGAGCGGGCCTGACCAAGAGGGGCCGTCCTCCCGGCTCTGGAAAAAAGCCGGGCCGTCCTCCCAAGGCAACCACAACAGATGTTTCTGCTTCTGCTGGGCCCAAGAGACGTCCAGGCCGCCCGCCCAAGAATCAGTCGCAGCCCACTCTCATTCCCTTTGCTCCGGCTGTATCTGCCGCTTCCGTGGATACAGAGCACGTGGCAGCATCAGCTGAAACTGCGCCGGTTGATGCTGACGCGGCTCTCGGACCAAGAGCCCGTGGACGGCCGAAGAAATATGCTGACGAGATGATTGCTGCGGGCCGAGGCAGGGGACGGGGCCGTGGGCGCGGTGGCGGCGGAAGAGGACGAGGGAGAGGGCGTGGTGAATTGCCTGCACAGCCCAGAAAACCAGGGGCAAGGCCCGTGGGTCGTCCGAAAAAGGGTTCAACTTCTGCTAGTACTTCTCAAAATGCTGCAAATGAAGATCTCAGGAGGAAGCTTGAACACTTTCAATCAAAAGTCAAGGAATCTCTTGCAGTGCTTAAGCCTCATTTTAACCATGAAAGTCCAGTCACTGCAATTGCTGCTATTCAAGAGCTAGAAGTACTGGGAACTATGGACCTCAATGTACCACTAAGGGATGAAACACTTCCACATCAAGTGGAGCTGCCACCACCACAGCCTCCAGTgcagcagcagcagcagccaccacagcagcagctgcagcagccaccacagcagccaccacagcaACACCTAGCACCACAACAACTGCCGCCACAGCCACCGATATTTCAGCAAACATATCCTCCATTTCATCTGCCGCAGTTCCACCATCACCAGCCTTCGCTGCAGTTCCAGCAACAGCAGCAGCAGCCGCCACAGCCACCGCCACAGCTATTCCAGCACCAGGCACAGCCTCCTTCCCACCAACAGTTTCATCCTTAG | 1524 | 0.5433 | MEPSSISPPPAPPATAVPFPAEPNDHLPPPIPEPPSNHPPYAEMIYTAIEALKEKDGSSKRAIAKYIEQVYTQLPPNHSDLLTQHLNHLKSRGLLQMVKKSYALPRSVPVSVPGPAPTQGTSAVPAAVVAITTTPRPRGRPRKAQNPVQNSPLPQDTVNVQVQQNAEPVWAALGLADEPVQAEGSGKKRGRPKKSGILGAGLTKRGRPPGSGKKPGRPPKATTTDVSASAGPKRRPGRPPKNQSQPTLIPFAPAVSAASVDTEHVAASAETAPVDADAALGPRARGRPKKYADEMIAAGRGRGRGRGRGGGGRGRGRGRGELPAQPRKPGARPVGRPKKGSTSASTSQNAANEDLRRKLEHFQSKVKESLAVLKPHFNHESPVTAIAAIQELEVLGTMDLNVPLRDETLPHQVELPPPQPPVQQQQQPPQQQLQQPPQQPPQQHLAPQQLPPQPPIFQQTYPPFHLPQFHHHQPSLQFQQQQQQPPQPPPQLFQHQAQPPSHQQFHP | 507 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma09g01645 | 507 | MobiDBLite | consensus disorder prediction | 282 | 301 | - | - | |
Gma09g01645 | 507 | MobiDBLite | consensus disorder prediction | 1 | 40 | - | - | |
Gma09g01645 | 507 | PANTHER | HISTONE H1-LIKE | 10 | 308 | - | - | |
Gma09g01645 | 507 | PANTHER | HISTONE H1-LIKE | 311 | 408 | - | - | |
Gma09g01645 | 507 | MobiDBLite | consensus disorder prediction | 133 | 155 | - | - | |
Gma09g01645 | 507 | MobiDBLite | consensus disorder prediction | 433 | 461 | - | - | |
Gma09g01645 | 507 | SMART | AT_hook_2 | 282 | 294 | IPR017956 | GO:0003677 | |
Gma09g01645 | 507 | SMART | AT_hook_2 | 135 | 147 | IPR017956 | GO:0003677 | |
Gma09g01645 | 507 | SMART | AT_hook_2 | 212 | 224 | IPR017956 | GO:0003677 | |
Gma09g01645 | 507 | SMART | AT_hook_2 | 331 | 343 | IPR017956 | GO:0003677 | |
Gma09g01645 | 507 | SMART | AT_hook_2 | 186 | 198 | IPR017956 | GO:0003677 | |
Gma09g01645 | 507 | SMART | AT_hook_2 | 233 | 245 | IPR017956 | GO:0003677 | |
Gma09g01645 | 507 | Gene3D | - | 34 | 111 | IPR036388 | - | |
Gma09g01645 | 507 | MobiDBLite | consensus disorder prediction | 403 | 507 | - | - | |
Gma09g01645 | 507 | Pfam | linker histone H1 and H5 family | 38 | 99 | IPR005818 | GO:0000786|GO:0003677|GO:0006334 | |
Gma09g01645 | 507 | PRINTS | AT-hook-like domain signature | 135 | 145 | IPR017956 | GO:0003677 | |
Gma09g01645 | 507 | PRINTS | AT-hook-like domain signature | 231 | 242 | IPR017956 | GO:0003677 | |
Gma09g01645 | 507 | PRINTS | AT-hook-like domain signature | 329 | 339 | IPR017956 | GO:0003677 | |
Gma09g01645 | 507 | ProSiteProfiles | Linker histone H1/H5 globular (H15) domain profile. | 37 | 106 | IPR005818 | GO:0000786|GO:0003677|GO:0006334 | |
Gma09g01645 | 507 | SUPERFAMILY | "Winged helix" DNA-binding domain | 34 | 113 | IPR036390 | - | |
Gma09g01645 | 507 | PANTHER | HISTONE H1 | 311 | 408 | - | - | |
Gma09g01645 | 507 | PANTHER | HISTONE H1 | 10 | 308 | - | - | |
Gma09g01645 | 507 | MobiDBLite | consensus disorder prediction | 181 | 360 | - | - | |
Gma09g01645 | 507 | PRINTS | Histone H5 signature | 24 | 45 | IPR005819 | GO:0000786|GO:0003677|GO:0006334|GO:0030527 | |
Gma09g01645 | 507 | PRINTS | Histone H5 signature | 51 | 68 | IPR005819 | GO:0000786|GO:0003677|GO:0006334|GO:0030527 | |
Gma09g01645 | 507 | PRINTS | Histone H5 signature | 130 | 144 | IPR005819 | GO:0000786|GO:0003677|GO:0006334|GO:0030527 | |
Gma09g01645 | 507 | Coils | Coil | 352 | 372 | - | - | |
Gma09g01645 | 507 | MobiDBLite | consensus disorder prediction | 1 | 39 | - | - | |
Gma09g01645 | 507 | CDD | H15 | 36 | 103 | IPR005818 | GO:0000786|GO:0003677|GO:0006334 | |
Gma09g01645 | 507 | SMART | h15plus2 | 35 | 101 | IPR005818 | GO:0000786|GO:0003677|GO:0006334 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma09g01645 | Gma-Chr9 | 41936027 | 41942524 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma09g01645 | 44 | 111 | Single Myb Histone (SMH) Gene Family | AT1G49950 | 42.647 | 4.55e-07 | 49.7 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma09g01645 | - | - | gmx:100788215 | 723.391 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma07g00912 | 07 | 9982661 | 9988255 | Gma09g01645 | 09 | 41936027 | 41942524 | GST |