Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01643 ATGAATTTTCAGTTGGCCAACGTTCCCACTCAGCAAACCACTTCCTTCAACCTTCTCAAAGTCCCCAAACGCTCCCACTTCAAATCTTCTTCCATGGATCGTAACAAAAAGGGTGCACCGGTGGTAGAGTTTTTTACTGAGTATGGAGAGGCAAGTAGGTTTGAAATCCACGAAGTGATTGGAAAAGGGAGCTACGGTGTTGTGTGTTCTGCTGTTGACACTCAAACTAGGGAAAAAGTTGCAATTAAGAAAATCAATGATGTTTTTGAGCATGTGTCAGATGCCACACGGATCCTAAGAGAAATTAAACTCCTTCGTTTGCTCCAACATCCTGATATAGTTGAAATTAAGCATATAATGCTTCCTCCCTCACGACGAGAGTTCAGGGATGTCTATGTTGTGTTTGAGTTGATGGAGTCTGACCTTCATCAAGTAATTAAGTCAAATGATGATCTTACCCCCGAGCACTACCAATTTTTCTTGTACCAACTTCTTCGAGGCCTCAAATTTATACATACAGCAAATGTGTTTCATCGTGACTTGAAGCCAAAAAATATTCTAGCTAATGCTAATTGCAAACTAAAAATATGTGATTTCGGACTTGCTCGAGTTTCATTTAATGAGGCCCCATCTGCTATATTCTGGACCGACTATGTTGCAACTCGGTGGTATCGTGCACCTGAACTTTGTGGTTCTTTTTTCTCAAAATATACGCCTGCAATTGATATTTGGAGCATTGGATGCATATTTGCAGAAATGCTCAGTGGGAAGCCATTGTTTCCTGGAAAAAATGTAGTGCACCAATTGGATCTCATAACTGACCTTCTTGGTACTCCTCCTGCTGAAACCATTTCTAGGATTCGGAATGAGAAGGCTAGAAGATACCTTGCTAGCATGCAGAAAAAGCAACCTATTCCATTCTCCAAAAAATTTCCAAATGCAGATCCATTGGGTCTTAATTTGCTGGAGCGATTACTTGCATTTGATCCTAAAGATCGTCCAGCAGCTGAAGAGGCACTAAGAGATCCTTATTTCCATGGTTTGTCAAATGTGGACCGTGAACCGTCGTCCACTCAGCCCATTTCAAAGCTTGAATTTGAGTTTGAGAGGAGAAAGTTGGCCAAAGATGATGTTAGAGAGTTGATTTATCGAGAGATTTTAGAGTATCATCCTCAGATGCTCGAAGAATATCTTCGTGGTGGAGAACAAACAAGCTTCATGTATCCAAGTGGGGTTGACCGGTTCAAGCGACAGTTTGCACATCTTGAGGAGCATTATGGCAAAGGTGAACGAAGCACTCCATTGTTGAGGCAGCACGCCTCCTTACCTAGAGAGCGAGTTCCTGCTCCCAAGGATGAAAATAATCAAAACAATGATGTTGAAAATCCAACTGGAGCAAATCATCAGAGTCCTCCAGGGTCTGATGTGACAAATTCTGGAAATCCAGATGCACAAAATGAACCCTCCAGGCCAAACTGCAGCGCACGTAGCCTGTTGAAGAGTGCCAGCATTAGTGGTTCAAAGTGTATAGATGTGAAACAAAGTAAAGTTTCAGAGGAGGAGCCACTTACAGGGGTCAACGATGAGCTGGATGAGTTGACACAGAAGGTTGCTTCCCTCCATGCTTAG 1629 0.4254 MNFQLANVPTQQTTSFNLLKVPKRSHFKSSSMDRNKKGAPVVEFFTEYGEASRFEIHEVIGKGSYGVVCSAVDTQTREKVAIKKINDVFEHVSDATRILREIKLLRLLQHPDIVEIKHIMLPPSRREFRDVYVVFELMESDLHQVIKSNDDLTPEHYQFFLYQLLRGLKFIHTANVFHRDLKPKNILANANCKLKICDFGLARVSFNEAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLSGKPLFPGKNVVHQLDLITDLLGTPPAETISRIRNEKARRYLASMQKKQPIPFSKKFPNADPLGLNLLERLLAFDPKDRPAAEEALRDPYFHGLSNVDREPSSTQPISKLEFEFERRKLAKDDVRELIYREILEYHPQMLEEYLRGGEQTSFMYPSGVDRFKRQFAHLEEHYGKGERSTPLLRQHASLPRERVPAPKDENNQNNDVENPTGANHQSPPGSDVTNSGNPDAQNEPSRPNCSARSLLKSASISGSKCIDVKQSKVSEEEPLTGVNDELDELTQKVASLHA 542
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01643 542 SUPERFAMILY Protein kinase-like (PK-like) 49 350 IPR011009 -
Gma09g01643 542 MobiDBLite consensus disorder prediction 509 528 - -
Gma09g01643 542 ProSitePatterns Protein kinases ATP-binding region signature. 60 84 IPR017441 GO:0005524
Gma09g01643 542 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 29 485 - -
Gma09g01643 542 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 29 485 - -
Gma09g01643 542 CDD STKc_TDY_MAPK 53 391 - -
Gma09g01643 542 SMART serkin_6 54 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01643 542 Gene3D Transferase(Phosphotransferase) domain 1 140 369 - -
Gma09g01643 542 ProSiteProfiles Protein kinase domain profile. 54 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01643 542 MobiDBLite consensus disorder prediction 444 498 - -
Gma09g01643 542 Gene3D Phosphorylase Kinase; domain 1 69 392 - -
Gma09g01643 542 ProSitePatterns MAP kinase signature. 89 192 IPR003527 GO:0004707|GO:0005524|GO:0006468
Gma09g01643 542 MobiDBLite consensus disorder prediction 453 498 - -
Gma09g01643 542 Pfam Protein kinase domain 54 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gma09g01643 Gma-Chr9 41904567 41910999 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01643 42 542 MAP Kinase Gene Family AT3G18040 79.842 0.0 807
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Gma09g01643 Pkinase 1.2e-66 CL0016
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02369 05 44559205 44564027 Gma09g01643 09 41904567 41910999 ECH
Gma09g01643 09 41904567 41910999 Gma09g01643 09 41904567 41910999 ECH
Gma07g00914 07 10013595 10019331 Gma09g01643 09 41904567 41910999 GST