Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01642 ATGGGTGTCTCAGGGAAGTGGATCAAGGCATTGGTGGCTCGAAAGAAATCAGAAAAGCCAGAGTCATTAGAGAAGGATGGAAATAAGGTTAAGGCTAGCAAGTTACACCATCAGGGAAAGCCTGCTGTCGAGTTTGATAATGGTAATCTTCCAAACGAATTTGATAATGATGCTACTCAACCTATCGGAGATGACAGTGGTCATACAAACATTGATGCCCATTATTCACCTTCTACTTCACAACAAGCACATGATGTTGCACATAATCATCAAATGAGGGAGGAATGGGCTGCAATACGCATTCAAACAGCATTTCGAGGATTTCTGGCCAGAAGAGCACTACGAGCTTTGAAAGGAGTGGTAAGGCTTCAGGCCCTTGTAAGAGGCTATGCAGTGAGAAAACAAGCTGCAATAACACTCCGTTGTATGCAAGCTTTGGTGAGGGTTCAGGCTCGTGTTCGGGCAAGGCATGTTCGCATCGCATTGGAAACTCAAGCAACACAACAGAAACTTAAGCAAAAGCTTGCAAACAAAGTTCAAGTTCGAGAAACAGAAGAAGGATGGTGTGATAGCATAGGATCTATTGAAGAAATTCAAGCTAAAATATTGAAGAGACAGGAGGCTGCAGCAAAACGAGGGAGAGCCATGGCTTATGCTCTAGCTCATCAGTGGCAGGCAGGATCAAGACAGCAGCCTGTTTCCTCTGGATTTGAACCAGATAAAAGTAACTGGGGTTGGAATTGGTTGGAAAGATGGATGGCTGTCCGTCCTTGGGAGAATCGCTTTGTTGACATTAATCTGAGGGATGGAGTAATAATACATGAAAATGGGGCTAAGGGTGGTCAAAATGGAACAACACATCAATCAAGACCTGCTAACAAGAAACCATTGTCATCAAACCCTCATCTGTACCCTGTAAGTCTGAGAACTGGTTCCATTCTTTCTGATGGCTGTGATTCTTCACCTACACTTAGTAAGTCAGCAGGTTTGCCAGAATCATCAGACACACAGCCTGTTAAGCCAAATTCTAAGGCAAATGTTGAAAATTCTGTTGAAGAAACATATTCAAAACCTGGAATTGAGTCAAGATCTCATTCAAATCCAAAGGAGAGAACATCTCAGGCAGATAAGCAGGCAAAAAAGCGATTATCTCTGCCTAACAATGGGGGTGGTCCTGGATCTCAAACTGCCAAACATCCTATTGGAACTAGTGTGAAAGGGACGCTAAGCACGCAAAAACCTAGCAGGGATAAGCGTAAGCTCAATAGAGGAAAGGATGTGAATATTTCAAAATCAGTTCCATAG 1305 0.4322 MGVSGKWIKALVARKKSEKPESLEKDGNKVKASKLHHQGKPAVEFDNGNLPNEFDNDATQPIGDDSGHTNIDAHYSPSTSQQAHDVAHNHQMREEWAAIRIQTAFRGFLARRALRALKGVVRLQALVRGYAVRKQAAITLRCMQALVRVQARVRARHVRIALETQATQQKLKQKLANKVQVRETEEGWCDSIGSIEEIQAKILKRQEAAAKRGRAMAYALAHQWQAGSRQQPVSSGFEPDKSNWGWNWLERWMAVRPWENRFVDINLRDGVIIHENGAKGGQNGTTHQSRPANKKPLSSNPHLYPVSLRTGSILSDGCDSSPTLSKSAGLPESSDTQPVKPNSKANVENSVEETYSKPGIESRSHSNPKERTSQADKQAKKRLSLPNNGGGPGSQTAKHPIGTSVKGTLSTQKPSRDKRKLNRGKDVNISKSVP 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01642 434 MobiDBLite consensus disorder prediction 276 434 - -
Gma09g01642 434 MobiDBLite consensus disorder prediction 279 296 - -
Gma09g01642 434 MobiDBLite consensus disorder prediction 14 41 - -
Gma09g01642 434 MobiDBLite consensus disorder prediction 363 378 - -
Gma09g01642 434 MobiDBLite consensus disorder prediction 388 411 - -
Gma09g01642 434 SMART iq_5 93 115 IPR000048 GO:0005515
Gma09g01642 434 SMART iq_5 116 137 IPR000048 GO:0005515
Gma09g01642 434 Gene3D - 95 136 - -
Gma09g01642 434 ProSiteProfiles IQ motif profile. 118 145 IPR000048 GO:0005515
Gma09g01642 434 PANTHER IQ-DOMAIN 5-RELATED 2 397 - -
Gma09g01642 434 PANTHER IQ-DOMAIN 5-RELATED 2 397 - -
Gma09g01642 434 MobiDBLite consensus disorder prediction 313 362 - -
Gma09g01642 434 ProSiteProfiles IQ motif profile. 94 122 IPR000048 GO:0005515
Gma09g01642 434 MobiDBLite consensus disorder prediction 14 89 - -
Gma09g01642 434 MobiDBLite consensus disorder prediction 62 86 - -
Gma09g01642 434 Pfam IQ calmodulin-binding motif 96 115 IPR000048 GO:0005515
Gma09g01642 434 Pfam IQ calmodulin-binding motif 118 135 IPR000048 GO:0005515
Gma09g01642 434 MobiDBLite consensus disorder prediction 412 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01642 Gma-Chr9 41892645 41896887 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01642 1 398 IQD Protein Family AT3G22190 55.362 2.00e-117 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01642 - - gmx:100787148 822.772