Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01639 ATGGAGGAATCAGATTCAACACCAAAGTCTCTGATGGAGAATCTGCTTGGCCTTTTGAGGGTTCGCGTGAAGCGTGGTGTCAACCTTGCCGTTCGTGATGTTCGAAGCAGCGACCCTTATGTTGTCATCAAGATGTACAACCAGAAACTAAAGACTCGTGTGATTAAAAAGGATGTGAATCCTGAGTGGAATGAAGACCTTACTCTTTCTGTTATAAATCCGAATCACAAAATTAAACTGactgtgtatgaccatgacacttttagcaaagatgacaaaatgggagatgcagaatttgacatctttccctttatagaggccttgaagatgaacttaactggccttccaaatggtactgtagtcacaagaatacaaccaagcaagcataattgcctggcagacgagagctgcataacttatagcaatggcaaggttgtccaagatatgatccttagattgcaaaatgtggagtgtggtgaagtggaaatccaattgcagtggattgatcttcctggttctaagggtttatga 531 0.1921 MEESDSTPKSLMENLLGLLRVRVKRGVNLAVRDVRSSDPYVVIKMYNQKLKTRVIKKDVNPEWNEDLTLSVINPNHKIKLTVYDHDTFSKDDKMGDAEFDIFPFIEALKMNLTGLPNGTVVTRIQPSKHNCLADESCITYSNGKVVQDMILRLQNVECGEVEIQLQWIDLPGSKGL 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01639 176 ProSiteProfiles C2 domain profile. 1 114 IPR000008 -
Gma09g01639 176 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 8 175 IPR044562 -
Gma09g01639 176 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 13 102 IPR035892 -
Gma09g01639 176 PANTHER CALCIUM-DEPENDENT ARF-TYPE GTPASE ACTIVATING FAMILY PROTEIN 8 175 - -
Gma09g01639 176 CDD C2_ArfGAP 16 159 - -
Gma09g01639 176 Pfam C2 domain 17 101 IPR000008 -
Gma09g01639 176 Gene3D C2 domain 13 174 IPR035892 -
Gma09g01639 176 SMART C2_3c 18 113 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01639 Gma-Chr9 41870211 41872006 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01639 49 176 C2H2 Transcription Factor Family AT1G70790 62.308 1.68e-54 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01639 - - gmx:100810504 348.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00373 18 3268002 3270583 Gma09g01639 09 41870211 41872006 ECH
Gma09g01639 09 41870211 41872006 Gma09g01639 09 41870211 41872006 ECH