Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01625 ATGCAACAACATTCTCATACACTCTTCACTACCATCACCATAATCCTCTTCTCATTCTTCTTCCCTCTAACATTTTCTGACCTCTCATCGGAGCGCGCGGCGCTGCTCGCCCTGCGCTCCGCCGTGCGCGGCCGCACCCTCCTCTGGAACGCCACCGCCGCCTCGCCCTGCGCCTGGCCCGGCGTCCAATGCGACGCTGCCAACGCTACCGTGGTCGAGCTCCACCTCCCCGCCGTTGCACTCTCCGGCGAGCTCCCAGCCAACGTGTTCCCGGCGCTCAAGAACCTCCACACCCTCAGCCTCCGCTTCAACTCCCTCTCCGGCACCCTCCCCGCCGACCTCGCCGCCTGCGCCGCCCTCCGCAACCTCTTCCTCCAACAGAACCACTTCTCCGGCGAGGTTCCGGCGTTCCTCTCCGCCATGACCGGCCTCATCCGCCTCAATTTGGCCTCCAACAACTTCTCCGGTCCAATTCCGGTCCGGTTTGGGAACCTCACCCGGTTGAGGACCCTTTTCCTTGAGAACAACCGGTTCAACGGTTCGCTTCCAAATTTTGAAGAACTCAATGAATTGGCTCAGTTCAATGTCTCATACAACATGTTAAACGGTTCTGTGCCTAAAAAGTTGCAAACTTTTGGTGAAGATTCGTTTTTAGGGAATACCCTTTGTGGGAAACCTCTAGCAATTTGTCCTTGGGACGACGGGGGTGGTGAGAGTGGTGCAAATGGGAATTCAAATTCAAGTGGGGTTGGAGGGGGTGAAGGGAGTGTGATTGGAGGGGAGAAGAATAAGAAGGGGAAGCTTTCTGGGGGTGCAATTGCTGGTATTGTTGTTGGGAGTGTGGTGGTTCTTTTGTTGGTTGTGTTTGCTTTGATTCTCTTGTGTAGAAGTGGGAACAAGACTAGGAGTGTTGATAATGTTAATAACATTGTGGGGTTGAAGGAGGAGCAGCATCAGCATCAGCATCAGCATGGGGAGGTGGGAATTGAGAGTGGCAATGTGGAGAATGGTGGTGGTGGGGGAGGTGGGAATTtggtggctgcagcagtggcggcggtgagtggcggcagcggtggtggtggtggtggtggtggtggtggtggAGGAGGAGGAGGAGGAGATAAGAAGTTGGTGTTTTATGGTAATAAGGTGAAGGTGTTTGATTTGGAGGATTTGTTGAGGGCTTCTGCTGAGGTGTTAGGGAAAGGGACTTTTGGGACTACCTATAAGGCGGTTATGGAGGATGGGCCTGTGGTGGCTGTGAAGAGGTTGAAGGATGTGACTGTTTCGGAGAAGGAGTTTAAGGAGAAGATTGATGGGGTGGGAATGATGGATCATGAGAATTTGGTGCCTCTCAGGGCTTACTACTATAGCAGGGATGAGAAGCTTCTTGTTCATGATTACATGCCAATGGGAAGCCTATCTGCAATTTTGCATGGAAACAAAGGAGCTGGTAGGACACCACTGAATTGGGAAATGAGATCAAGCATTGCACTAGGAGCTGCTTGCGGCATCCAGTACCTGCATTCACAAGGGCCAAGTGTTTCTCATGGAAACATAAAATCCTCCAACATCCTCCTAACCAAGTCCTATGATGCCAGGGTGTCTGATTTCGGCCTCACACACCTTGTTGGCCCTTCATCCACGCCTAACAGGGTTGCTGGCTATCGTGCTCCCGAAGTAATCGATCCGCGCAAAGTGTCTCAGAAGGCTGATGTATACAGTTTCGGAGTGTTGCTCTTGGAGCTTCTCACAGGAAAGGCTCCTACACATGCCCTCTTGAATGAGGAAGGAGTGGACCTTCCAAGATGGGTGCAATCAGTTGTTAGAGAAGAGTGGAGTTCTGAGGTGTTTGATATTGAACTCCTTAGGTATCAGAATTCTGAAGAGGAGATGGTTCAGTTGTTGCAACTTGCAGTGGATTGTGTTGTTCCATACCCTGATAACCGTCCTTCAATGTCTCAAGTGATTCAACGCATACAAGAGTTACGTAGGCCTAGCATGAAAGAGGCTACTCAAGACCAAATCCAACAACTTGATTTGATCAATGATATAGATGATGCGTCTTCTAGATGA 2076 0.4904 MQQHSHTLFTTITIILFSFFFPLTFSDLSSERAALLALRSAVRGRTLLWNATAASPCAWPGVQCDAANATVVELHLPAVALSGELPANVFPALKNLHTLSLRFNSLSGTLPADLAACAALRNLFLQQNHFSGEVPAFLSAMTGLIRLNLASNNFSGPIPVRFGNLTRLRTLFLENNRFNGSLPNFEELNELAQFNVSYNMLNGSVPKKLQTFGEDSFLGNTLCGKPLAICPWDDGGGESGANGNSNSSGVGGGEGSVIGGEKNKKGKLSGGAIAGIVVGSVVVLLLVVFALILLCRSGNKTRSVDNVNNIVGLKEEQHQHQHQHGEVGIESGNVENGGGGGGGNLVAAAVAAVSGGSGGGGGGGGGGGGGGGGDKKLVFYGNKVKVFDLEDLLRASAEVLGKGTFGTTYKAVMEDGPVVAVKRLKDVTVSEKEFKEKIDGVGMMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSAILHGNKGAGRTPLNWEMRSSIALGAACGIQYLHSQGPSVSHGNIKSSNILLTKSYDARVSDFGLTHLVGPSSTPNRVAGYRAPEVIDPRKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSVVREEWSSEVFDIELLRYQNSEEEMVQLLQLAVDCVVPYPDNRPSMSQVIQRIQELRRPSMKEATQDQIQQLDLINDIDDASSR 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01625 691 ProSitePatterns Protein kinases ATP-binding region signature. 400 422 IPR017441 GO:0005524
Gma09g01625 691 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 691 - -
Gma09g01625 691 ProSiteProfiles Protein kinase domain profile. 394 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01625 691 SUPERFAMILY L domain-like 49 209 - -
Gma09g01625 691 Gene3D Phosphorylase Kinase; domain 1 374 468 - -
Gma09g01625 691 Pfam Leucine rich repeat N-terminal domain 29 65 IPR013210 -
Gma09g01625 691 SUPERFAMILY Protein kinase-like (PK-like) 398 660 IPR011009 -
Gma09g01625 691 PANTHER OS05G0588300 PROTEIN 1 691 - -
Gma09g01625 691 CDD STKc_IRAK 400 663 - -
Gma09g01625 691 Gene3D Transferase(Phosphotransferase) domain 1 469 688 - -
Gma09g01625 691 Pfam Protein kinase domain 397 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01625 691 Gene3D Ribonuclease Inhibitor 27 218 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01625 Gma-Chr9 41604198 41606719 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01625 27 680 Receptor kinase-like Gene Family AT1G48480 56.753 0.0 713
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gma09g01625 Pkinase 1.6e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01625 - - gsj:114425465 1118.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00930 07 10246447 10248975 Gma09g01625 09 41604198 41606719 GST
Gma05g02395 05 44747677 44749986 Gma09g01625 09 41604198 41606719 PCT
Gma08g00534 08 4371761 4374541 Gma09g01625 09 41604198 41606719 PCT
Gma09g01625 09 41604198 41606719 Gma05g02395 05 44747677 44749986 PCT
Gma09g01625 09 41604198 41606719 Gma08g00534 08 4371761 4374541 PCT