Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01618 ATGTTTTTTCACGGAATGCTTCAGGGTATTCTTATTGGGTTTGATAATCTGGATGGGGTGATTCACATAATACATGAAGCTTCAAGTAACTCAACTGCAGCAGTTGGTTTACGCAATGGAAATGAAAAGAGTGGGTTATCTAGCAGGTCCTATGATTACTATGACTTTGTCACAATATTTTCTACAGATTATTTTAATGATGATGGTTGGTCTCTTGGAAAACAAAACCCAAAATTCAATAGTCACAACCACAAGCGCATCATCGAAGTGTCGCTTCTCCCTTCTTTCCCTCACTTTCAGGAAGATTATAGAGATATGAGTTCTCAACTTCGGAGAGAAAGAAGGGACTGGTCCAGGGTTCCACCACAAGGTGCTACTCGTCAAGAATGGGTCCCCAGAGGGGCTGCTGCTGCGTCCAGCAATGTTGCTCAGCCATCAAATTTGCATTCAAACAACAATGCtgatgctggttcttccaatcaaggggtggccgtcgctgctccgtcgtcggtgagtcgcgctagaagcaacaatcatgggaatgattccggttcttccaatcaaggggtggccgttgctgttgtgtcggttagtcacggtagaagcaacaatcatgggactgatgctgccggttcttccaatcaaggggtggccattgctgctctgtcggtgagtcgcggtagaagcaacattcatgggaatgatgctggttcttccaatcaaggggtggccgttgctgctctgccagccagtcgcggtagaagcaacaatcatgggactgatgctgccggttcttccaatcaaggggtggccattgctgctctgtcagtgagttgcggtagaagcaacattcatgggcatgatgctggttcttccaatcaaggggtggccgttgctgctccaccagccagtcgcggtagaagcaacaatcccaggaatgatgctggttcttccaatcaaggtttggccgttgctccgccggtgaatcgtggtagaagcaacaatcaagggaaagattctggtccttccagtcaaggggtggctgttgctgcactggcgagtcgtggtagaagcaacaatcatgggactCATAGGATGGAAAAGGAAAAGGATAAGGGGAACAAGAGTGGGAGTCAGGTGGAGAAGGGATTGGGAGTGGGAGTCAGATACTCTAGTTTGCCTCAACTGGTGCAAGAGATTCAGGAGAAGCTCATGAAAGGTACTGTGGAGTGCATGATTTGCTATGAGATGGTCCAGAGGTCTGCGGCGGTTTGGTCTTGCTCCAGCTGTTACTCTATCTTTCACCTGAACTGCATCAAGAAGTGGGCTAGGGCACCAATTTCAAGTGATTTGTCCTTGTCTGTGGAGAAGAATCATGAGCTTAATTGGCGGTGTCCTGGTTGCCAGTCTGTGAAATTTACCTCTTCAAAGGAGATTAGGTATGTTTGCTTTTGTGGGAAGAGGATAGACCCTCCATCTGATTTGTATCTGACACCTCACTCGTGTGGAGAACCATGTGGGAAGCCTCTTCAGAAGGTGTTGGTTGCTGGAGGGAATAGGGATGATCTTTGCCCTCATGCTTGTGTCTTGCAATGCCATCCAGGACCATGCCCTCCCTGTAAAGCATTTGCTCCTCCTCGGTTGTGCCCTTGTGGGAAGAAAAATATTACCACCCGTTGCTCTGATCGGCAGTCTGTTCTTACCTGTGGACAATGCTGTGATAAACTTCTTGAATGTGGGCGGCATCGCTGTGAACACATTTGTCATGTGGGTCCATGCAATCCTTGTAAGGTTCCAATCAGTGCAACTTGTTTTTGCAGTAAAAAGACAGAGGTTTTTTCTTGTGGGGACATGTCTGTGAAGGGTGAAATTGAAGCAAAAGGTGGGGTTTTTGCTTGTGGTTCCTATTGTCTAAAGAAACTTGGTTGTGGTAATCATGTCTGTAGTGAGATTTGCCATCCAGGAAGCTGTGGGGAATGTGAATTTTTACCTAGCCGGGTTAAGACATGCTGTTGTGGGAAAACAAGGTTGGAGAATGAACGCCAGAGTTGTTTGGATCCGATACCTACCTGCTCTAAAGTATGTGGCAAGCTGCTTCATTGTGGCATGCATAGTTGTAAAGAGGCATGTCATGTTGGGGAGTGTCCACCTTGCTTGGTTGAAGTTTCACAGAAGTGCCGTTGTGGCTCAACTTCCCGAACTGTGGAGTGCTATAAGACTACGATGGAGAATGAGAAATTTTTGTGTGAAAAGTCTTGTGGGATAAAAAAGAATTGTGGAAGGCATCGATGTAGTGAAAGGTGTTGTCCATTTACTAATTCAAATCATTATAATACCTTTAGTGGGGATTGGGCTCCTCACTTTTGTTCCATGCCATGTGGAAAGAAGCTAAGGTGTGGCCAGCATTCGTGTGAATGTCTGTGTCACAGTGGTCATTGTCCACCTTGTTTCCAAACAATCTTTAATGAATTGGCTTGTGCTTGTGGTAGGACTTCAATACCTCCTCCTCTACCGTGTGGCACACCGCCTCCCTCATGTCAGCTTCCGTGCTCAGTTCCTCAGCCATGTGGTCATTCAGTCTCACACAGTTGCCATTTTGGAGACTGCCCTCCTTGTTCAGTTCCTGTAGCAAAAGAATGTATTGGCGGGCATGTAGTTCTTAGAAACATACCTTGTGGTTCAAAGGATATCAGATGCAATCATCCCTGTGGGAAGACCAGGCAGTGTGGTTTACATGCATGTGGTAGAACATGTCACCCCCCACCTTGTGATAGTCAATCTGGTGTTGTGCAAGGTTTCAAAGCACCATGTGGCCAAACATGTGGTGCTCCAAGAAGAAGCTGCCGGCACACATGTATGGCTCCTTGTCACCCTTCATCTCCATGCCCAGATATAAGGTGTGAATTCCCTGTTACAATCACTTGCTCTTGTGGCCGTGTAACCGCAAATGTTCCTTGTGATGGTGGTGGTAGCAGTAGCAATTATAATGCTGATGCCATACATGAAGCTTCCATTATTCAAACATTGCCTGCACCACTTCAACCAGTTGATGCAAATGGCAAGAAAGTTCCCCTAGGACAAAGAAAACTGATATGTGATGATGAATGTGCTAAGCTGGAACGCAAAAGGGTTCTCGCAGATGCTTTTGACATTACTGCTCCAAATCTGGACTCTCTTCATTTTAGTGATAACTCTCTTTCTTCTGAATTGCTTTCTGATTTTTTTAGGCGTGAGCCAAAATGGGTTTTAGCTGTTGAGGAGAGATGCAAAATTTTAGTTCTTGGCAAGAGTAGAGGAATAGGAACTGCACATGGTTTAAAAGTCCACATCTTTTGTCCCATGCTGAAGGAAAAAAGAGATGCAGTGAGATTGATTGCTGATAGATGGAAGCTTGCAGTCAATGCTGCTGGCTGGGAGCCAAAGCGATTTATTGTAATTTCTGTTACCCCAAAATCAAAGGCCCCAGCTCGTGTGATAGGGGTTAAGGGTACTACAACTTTAAATGTGCCTCTTCCTCCTGCATTTGATCCATTGGTTGATATGGACCCGCGACTTGTTGTCTCGTTTCCAGACTTACCAAGGGATACTGAAATTAATTCCTTGGTGTTGAGGTTTGGTGGCGAGTGTGAGCTTGTTTGGTTGAATGACAAGAATGCTTTGGCTGTTTTTCATGATCCTGCCCGAGCTGCAACTGCAATGAGGAGGTTGGATTATGCAACAGTTTATCAGGGAGCTGTTTTGGTTGCCCCGAATGCTGGGGCATCGGCGGCATCTTCAGCTACCAATGCCTGGGGAGGAGCTCTGCCGGCATTGAAAGGTAACTCATGGAAAAAGGCTGTGGCTCAAGACTCTGGTTGGGGAGATTCTGGGGTTGGTGAAGAGTGGACTGCTGGTTCTGTGAATATCCAGCCATCTGTTTGGAAGAAGGAAGCACCTCTGGCTGCTTCTTTAAATCGTTGGAATGTCTTGGAGCAGGAGTCAAGTTCAAGTTCATCGTCTACAACTATTAGAGCTGATATTTCTGGGAAGAAAACTGAAAATACTGGTGAAGAAGGTGGCTCAAAGGAAGAGGAAAACTTGGATGCAACTTCTGAAGTAGTTGATGATTGGGAGAAGGCTTATGAATGA 4128 0.3823 MFFHGMLQGILIGFDNLDGVIHIIHEASSNSTAAVGLRNGNEKSGLSSRSYDYYDFVTIFSTDYFNDDGWSLGKQNPKFNSHNHKRIIEVSLLPSFPHFQEDYRDMSSQLRRERRDWSRVPPQGATRQEWVPRGAAAASSNVAQPSNLHSNNNADAGSSNQGVAVAAPSSVSRARSNNHGNDSGSSNQGVAVAVVSVSHGRSNNHGTDAAGSSNQGVAIAALSVSRGRSNIHGNDAGSSNQGVAVAALPASRGRSNNHGTDAAGSSNQGVAIAALSVSCGRSNIHGHDAGSSNQGVAVAAPPASRGRSNNPRNDAGSSNQGLAVAPPVNRGRSNNQGKDSGPSSQGVAVAALASRGRSNNHGTHRMEKEKDKGNKSGSQVEKGLGVGVRYSSLPQLVQEIQEKLMKGTVECMICYEMVQRSAAVWSCSSCYSIFHLNCIKKWARAPISSDLSLSVEKNHELNWRCPGCQSVKFTSSKEIRYVCFCGKRIDPPSDLYLTPHSCGEPCGKPLQKVLVAGGNRDDLCPHACVLQCHPGPCPPCKAFAPPRLCPCGKKNITTRCSDRQSVLTCGQCCDKLLECGRHRCEHICHVGPCNPCKVPISATCFCSKKTEVFSCGDMSVKGEIEAKGGVFACGSYCLKKLGCGNHVCSEICHPGSCGECEFLPSRVKTCCCGKTRLENERQSCLDPIPTCSKVCGKLLHCGMHSCKEACHVGECPPCLVEVSQKCRCGSTSRTVECYKTTMENEKFLCEKSCGIKKNCGRHRCSERCCPFTNSNHYNTFSGDWAPHFCSMPCGKKLRCGQHSCECLCHSGHCPPCFQTIFNELACACGRTSIPPPLPCGTPPPSCQLPCSVPQPCGHSVSHSCHFGDCPPCSVPVAKECIGGHVVLRNIPCGSKDIRCNHPCGKTRQCGLHACGRTCHPPPCDSQSGVVQGFKAPCGQTCGAPRRSCRHTCMAPCHPSSPCPDIRCEFPVTITCSCGRVTANVPCDGGGSSSNYNADAIHEASIIQTLPAPLQPVDANGKKVPLGQRKLICDDECAKLERKRVLADAFDITAPNLDSLHFSDNSLSSELLSDFFRREPKWVLAVEERCKILVLGKSRGIGTAHGLKVHIFCPMLKEKRDAVRLIADRWKLAVNAAGWEPKRFIVISVTPKSKAPARVIGVKGTTTLNVPLPPAFDPLVDMDPRLVVSFPDLPRDTEINSLVLRFGGECELVWLNDKNALAVFHDPARAATAMRRLDYATVYQGAVLVAPNAGASAASSATNAWGGALPALKGNSWKKAVAQDSGWGDSGVGEEWTAGSVNIQPSVWKKEAPLAASLNRWNVLEQESSSSSSSTTIRADISGKKTENTGEEGGSKEEENLDATSEVVDDWEKAYE 1375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01618 1375 CDD NF-X1-zinc-finger 899 957 - -
Gma09g01618 1375 CDD NF-X1-zinc-finger 846 894 - -
Gma09g01618 1375 MobiDBLite consensus disorder prediction 1324 1375 - -
Gma09g01618 1375 PANTHER NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1 387 1348 IPR034078 GO:0003700
Gma09g01618 1375 SUPERFAMILY RING/U-box 401 472 - -
Gma09g01618 1375 CDD NF-X1-zinc-finger 569 617 - -
Gma09g01618 1375 CDD RING-CH-C4HC3_NFX1 410 469 - -
Gma09g01618 1375 Pfam NF-X1 type zinc finger 701 718 IPR000967 GO:0005634|GO:0008270
Gma09g01618 1375 Pfam NF-X1 type zinc finger 941 966 IPR000967 GO:0005634|GO:0008270
Gma09g01618 1375 Pfam NF-X1 type zinc finger 643 660 IPR000967 GO:0005634|GO:0008270
Gma09g01618 1375 Pfam NF-X1 type zinc finger 579 597 IPR000967 GO:0005634|GO:0008270
Gma09g01618 1375 Pfam NF-X1 type zinc finger 759 770 IPR000967 GO:0005634|GO:0008270
Gma09g01618 1375 Pfam NF-X1 type zinc finger 526 541 IPR000967 GO:0005634|GO:0008270
Gma09g01618 1375 Pfam NF-X1 type zinc finger 856 873 IPR000967 GO:0005634|GO:0008270
Gma09g01618 1375 Pfam NF-X1 type zinc finger 799 816 IPR000967 GO:0005634|GO:0008270
Gma09g01618 1375 Pfam NF-X1 type zinc finger 909 924 IPR000967 GO:0005634|GO:0008270
Gma09g01618 1375 MobiDBLite consensus disorder prediction 360 377 - -
Gma09g01618 1375 CDD NF-X1-zinc-finger 633 678 - -
Gma09g01618 1375 CDD NF-X1-zinc-finger 789 832 - -
Gma09g01618 1375 CDD NF-X1-zinc-finger 937 986 - -
Gma09g01618 1375 CDD NF-X1-zinc-finger 502 562 - -
Gma09g01618 1375 ProSiteProfiles Zinc finger PHD-type profile. 408 471 IPR019787 -
Gma09g01618 1375 MobiDBLite consensus disorder prediction 1324 1342 - -
Gma09g01618 1375 MobiDBLite consensus disorder prediction 1343 1375 - -
Gma09g01618 1375 PANTHER NF-X1-TYPE ZINC FINGER PROTEIN NFXL1 387 1348 - -
Gma09g01618 1375 MobiDBLite consensus disorder prediction 112 188 - -
Gma09g01618 1375 MobiDBLite consensus disorder prediction 285 381 - -
Gma09g01618 1375 MobiDBLite consensus disorder prediction 139 188 - -
Gma09g01618 1375 ProSiteProfiles Zinc finger RING-type profile. 411 469 IPR001841 -
Gma09g01618 1375 CDD NF-X1-zinc-finger 691 739 - -
Gma09g01618 1375 SMART znfxneu3 701 720 IPR000967 GO:0005634|GO:0008270
Gma09g01618 1375 SMART znfxneu3 856 874 IPR000967 GO:0005634|GO:0008270
Gma09g01618 1375 SMART znfxneu3 579 598 IPR000967 GO:0005634|GO:0008270
Gma09g01618 1375 SMART znfxneu3 909 939 IPR000967 GO:0005634|GO:0008270
Gma09g01618 1375 SMART znfxneu3 524 542 IPR000967 GO:0005634|GO:0008270
Gma09g01618 1375 SMART znfxneu3 799 818 IPR000967 GO:0005634|GO:0008270
Gma09g01618 1375 SMART znfxneu3 948 969 IPR000967 GO:0005634|GO:0008270
Gma09g01618 1375 SMART znfxneu3 643 662 IPR000967 GO:0005634|GO:0008270
Gma09g01618 1375 MobiDBLite consensus disorder prediction 306 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01618 Gma-Chr9 41509012 41517133 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-X1 Gma09g01618 zf-NF-X1 15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01618 K12236 - gmx:100819219 2591.99