Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01617 ATGCAAGGGTCATTCATTCACTTCCTTTACTTCCAAAAGTGGGAGCATCTCAATCTCACTGACCTCATCATCTTCATCCACCACCATATATACTATAGGCATATATCAAAGGTTCACTTCTCCTGCTCAAAAATAGATATGGAATCTGAGAGGCCTAGCAGCACTATTAATGAGacctacaaacaacaacaagaaccagaagaagaagatgatgatgattatcataatgaagaagaagaagaagaagaagaagaaaacaatgaGATCCTCAAGAGAAGAATCTCCAACCACCCTCTCTATGGACTGCTGGTTGAAGCTCACTTGGACTGTTTGAAGGTTGGTGACATTTCCAACTTGGAGAGGGAGCTGAAGATAGATCAGATGCAAGCAACGGAGAAGCAAAACTTGGGCATGTTCAGCCAATCTGAGCTTGATCTCTTCATGGAAGCATATTGTTTGGCACTTGGCAAGCTTAAAGAAGCAATGGTGGAACCACAACAGAAGTCAATGGCTTTCATAAACAACATGCATTCACAACTTAGGGAGCTCACCAAGGCAACCTTGCCTGCACCGAATGCTGAACCAGCTGCAGCTACCACATCTTCTACTAGTGAGTGCAAATTCAGAAGAAAGCCAACAATTTAG 645 0.3783 MQGSFIHFLYFQKWEHLNLTDLIIFIHHHIYYRHISKVHFSCSKIDMESERPSSTINETYKQQQEPEEEDDDDYHNEEEEEEEEENNEILKRRISNHPLYGLLVEAHLDCLKVGDISNLERELKIDQMQATEKQNLGMFSQSELDLFMEAYCLALGKLKEAMVEPQQKSMAFINNMHSQLRELTKATLPAPNAEPAAATTSSTSECKFRRKPTI 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01617 214 Coils Coil 67 87 - -
Gma09g01617 214 MobiDBLite consensus disorder prediction 64 85 - -
Gma09g01617 214 Pfam KNOX1 domain 90 114 IPR005540 GO:0003677|GO:0005634
Gma09g01617 214 SMART KNOX2_2 134 185 IPR005541 GO:0003677|GO:0005634
Gma09g01617 214 Coils Coil 116 136 - -
Gma09g01617 214 Pfam KNOX2 domain 142 184 IPR005541 GO:0003677|GO:0005634
Gma09g01617 214 MobiDBLite consensus disorder prediction 194 214 - -
Gma09g01617 214 MobiDBLite consensus disorder prediction 51 88 - -
Gma09g01617 214 SMART KNOX1_2 88 134 IPR005540 GO:0003677|GO:0005634
Gma09g01617 214 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 75 181 - -
Gma09g01617 214 MobiDBLite consensus disorder prediction 189 214 - -
Gma09g01617 214 PANTHER FUSED COMPOUND LEAF 1 75 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01617 Gma-Chr9 41488782 41493460 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01617 88 188 Homeobox Transcription Factor Family AT4G08150 34.579 3.43e-12 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01617 - - gsj:114367439 359.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00947 07 10472745 10476512 Gma09g01617 09 41488782 41493460 GST