Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01592 ATGGCAGACACAAATTCAGTTGAAGTGATTTTGGATTTTCTGAAGAGGAATCGGTTCACGCGAGCTGAGGCAGCTTTGCGTAGTGAGCTCAGTAACTGTTCTGATGTGAATGGTTTCTTGCAGAAGCTTACATTGGACGAAAAGGACTTGCATGGTGGGTTGCAGAATGATAAGGGGAAGCCCGTGGTAGAAAATCAAGGGTTGGATTCTCGTGACAGTGTTGAAGTTTCTAAAGAACTGATTGTGAAGGAAATAGAGTGTGGGACTGGTAAAAATGCTTCTGAAAGCAAGTGGAAAACTGTTGCTCCTACTGGTGAAAGCAATAAGTCTAATGAAGTGGTTGGGACGAGTGACAAAAACTTCACTTTCTCCAAGAGTTCGGAGGACAGTGTTCTTGATTTGTACTCATGGAAGTTTAATGCCAGCAATGGTCCTGTGGAGCCTTACCAAAATGATGGTGGAAGTAGGCCTAATAATGATTTAAAGGCCCCGGTATCTCAGCAATCAAAGTATCAAACTAGTGAAGCCCTTGATGCAACCAACAGGAATGTGAAATCTAGGGAGGAAAATAATGTGCCTGCCGAAAAAACATCCTCATGGCTTGGAAATATTGGTAAAGCCTCTACGGAACCAAAGTATGACCTTATGCAGAGCAAAGAACCTAGGGAAATTGATCGGCAGTTTAAATTTAATGCTTCATCTCTTAAAGAGAACTTGACAGATAATGTCTTATCAAGAACTGATGAGAATGTGAATTCATCTACAGACCTATGGAAAGATTGTTCTGTCAAGACTGTTTTCCCTTTCTCAAAGGGGGATATGTCTACAAGCTACAACGGTTCAACTTATTCTGACAGAAAAGAGGAAAAGAGAAGGGCAGAAAACAGTGATGTTAGGGCATCAGTAAAAGAGCAAGTGGATGAAGTGGGAAGAGCTCTTTACCTAGGAAAGTTGCAAGGCAGTTCTGGCAGCTTAAGTTTTCCTCTTGCACCAGAAAATCAGAAGGAAGAGTTTCCTAGGCTTCCTCCTGTAAAGATAAAGTCAGAAGATAAGCCTTTTACTTTTAATTGGGGGGAGAAGTTTGAGTGTGATGGACTTGCTGTGAAACTCGCTGGTGCTGACAACACCTTACTTATTGGGTCATATCTGGATGTCCCTATTGGACAAGAAATTAAAAATACAGGTGTGAGGAAGGCTATAGGGGGCAGTTGGTTGTCTGTAAGTCATGGGATTACAGAGGATACATCTGATCTTGTATCAGGTTTTGCAACAATTGGGGATGGGTTGTGTGAATCTGTTGATTATCCAAatgaatattgggactctgatgaatatgatgatgatgaagatgttgggtacacgagacaaCCTATCGAGGATGAGGCCTGGTTTTTGGCACACGAAATAGATTACCCTAGTGACAATGAAAAGGGGACTGGGCATGGAAGTGTTCCAGATCCTCAGGAAAGAGGTCCAGCCAAAGATGAGGAGGATGATCAATCTTTTGCTGAGGAGGATTCTTACTTCTCTGGTGAGCAATATATTCTACCAAAAAATGTTGAGCCGGTCACTGCTTCAGATGATCCTATTGGTCTAACAATTACTGAAATGTATGGAAGAACTAATGGTAATGATGTAATGCCTCAATATGATAGACAATTGATGGATGTTGAAGAACTGAATCTGATGCATATGGAACCTGTCAGGCAGGGCTTTGTCACTCACAAAAATGATCTCATCATGATGGGAGATGGGAAGGTTCTGAATCATAGTGCGAGGTCACGAATTGAGGACATGGAAGATGATCAACATGGTTCAGTTAGATCAATTGGGGTGGGGATCAACAGTGATGCTGCTGATATTGGCAGTGAAGTGCATGGAAGTTTGGTTGGTGGTAGCAGTGAAGGGGATTTAGAATATTTCCGTGATCATGATACTACTACACACAGTTTGGATAAGAATTCTATTAACAAATCATTCAAAAATAATAAGAAAAATGACAAGACTGAGTCAAATAAATATGTCATTGACAGTGATAAAGATGCATGCTCACAGATAAAAGCACATACTGATGGGAACTTCTCATTTCCCCAATCTCTTAGAGATAGCCAGATGATTCATGCTGGCTCCAGTAAGACCCTATGGTCGAGTAATTGTAATGTAGAAGAAGCAGATGACTGTATTAATGCATTTGTGGGATCTGATGACATGCTTACTTCATGGAAGAGGAAGAGTAGTGATTCTTTGCCTGTTAAAAGTTCTAGGGATGAGAATAATGCTATTGCGGTAAGATCCAGAAACTCTTCTCCAACTACAGTCTCGAATTATGGGTATACTGATGGAGAGCTTGTCAAACTAGAAAAGGATGAAAAAGTTAGCATTGTAAGGGAAGATGATCTAGGTGCATCACTAGAGGATGAAGAGGCAGCTGCTGTGCAAGAGCAGGTAAGGCAAATAAAGGCTCAGGAGGAGGAATTTGAAACCTTCAATCTAAAGATTGTGCACAGGAAAAACAGAACTGGCTTTGAGGAGGACAAGAATTTCCATGTTGTTTTAAATTCTGTACTAGCTGGGCGCTATCATGTCACTGAGTATCTGGGATCTGCTGCATTTAGCAAAGCTATACAAGCTCATGACCTGCACACAGGCATGGATGTTTGTGTTAAAATTATAAAGAACAACAAGGACTTCTTTGACCAAAGCCTTGATGAGATCAAGCTTCTTAAGTATGTCAATAAGCATGATCCTTCAGACAAGTACCACCTTCTAAGATTGTATGATTACTTCTATTATAGAGAACATTTGTTAATAGTATGTGAACTACTTAAAGCCAACTTATATGAGTTTCACAAATTTAATCGAGAATCAGGGGGTGAAGTGTATTTCACGATGCCAAGGTTGCAGTCAATTACCATTCAGTGTTTGGAAGCACTTCAGTTTTTGCACAGTCTTGGACTAATACATTGTGACTTGAAGCCGGAGAATATTTTGGTTAAGAGCTATAGCAGATGTGAGGTTAAGGTCATTGATCTCGGAAGTAGCTGTTTTGAGACAGATCACCTTTGCTCGTATGTTCAGTCCAGGTCTTATCGTGCTCCTGAGGTTATTTTGGGGCTTCCATATGACAAGAAGATTGACATCTGGTCACTTGGATGCATCTTGGCAGAACTTTGTACTGGCAATGTTCTCTTCCAAAATGATTCCCCTGCGACATTACTTGCTCGGGTGATTGGGATCATTGGCCCAATTGATCAAGGTTTGCTTGCTAAAGGACGGGATACATATAAGTACTTCACAAAAAATCATATGCTTTATGAACGGAATCAGGAAAGCAACAGGTTAGAATACCTGATTCCTAAAAAGACATCATTGAGGCATAGATTACCGATGGGGGACCAAGGCTTCATCGACTTTGTTGCTCATTTGCTTGAGGTTAACTCGAAGAAGCGGCCTTCTGCATCCGAGGCGCTGAAGCACCCATGGTTGTCATACCCTTATGAGCCAATATCATCTTGA 3516 0.4044 MADTNSVEVILDFLKRNRFTRAEAALRSELSNCSDVNGFLQKLTLDEKDLHGGLQNDKGKPVVENQGLDSRDSVEVSKELIVKEIECGTGKNASESKWKTVAPTGESNKSNEVVGTSDKNFTFSKSSEDSVLDLYSWKFNASNGPVEPYQNDGGSRPNNDLKAPVSQQSKYQTSEALDATNRNVKSREENNVPAEKTSSWLGNIGKASTEPKYDLMQSKEPREIDRQFKFNASSLKENLTDNVLSRTDENVNSSTDLWKDCSVKTVFPFSKGDMSTSYNGSTYSDRKEEKRRAENSDVRASVKEQVDEVGRALYLGKLQGSSGSLSFPLAPENQKEEFPRLPPVKIKSEDKPFTFNWGEKFECDGLAVKLAGADNTLLIGSYLDVPIGQEIKNTGVRKAIGGSWLSVSHGITEDTSDLVSGFATIGDGLCESVDYPNEYWDSDEYDDDEDVGYTRQPIEDEAWFLAHEIDYPSDNEKGTGHGSVPDPQERGPAKDEEDDQSFAEEDSYFSGEQYILPKNVEPVTASDDPIGLTITEMYGRTNGNDVMPQYDRQLMDVEELNLMHMEPVRQGFVTHKNDLIMMGDGKVLNHSARSRIEDMEDDQHGSVRSIGVGINSDAADIGSEVHGSLVGGSSEGDLEYFRDHDTTTHSLDKNSINKSFKNNKKNDKTESNKYVIDSDKDACSQIKAHTDGNFSFPQSLRDSQMIHAGSSKTLWSSNCNVEEADDCINAFVGSDDMLTSWKRKSSDSLPVKSSRDENNAIAVRSRNSSPTTVSNYGYTDGELVKLEKDEKVSIVREDDLGASLEDEEAAAVQEQVRQIKAQEEEFETFNLKIVHRKNRTGFEEDKNFHVVLNSVLAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPSDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHSLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLPYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIDQGLLAKGRDTYKYFTKNHMLYERNQESNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEVNSKKRPSASEALKHPWLSYPYEPISS 1171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01592 1171 MobiDBLite consensus disorder prediction 145 196 - -
Gma09g01592 1171 Gene3D Phosphorylase Kinase; domain 1 854 941 - -
Gma09g01592 1171 Coils Coil 812 832 - -
Gma09g01592 1171 SMART serkin_6 860 1162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01592 1171 MobiDBLite consensus disorder prediction 277 298 - -
Gma09g01592 1171 ProSiteProfiles Protein kinase domain profile. 860 1162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01592 1171 PANTHER - 2 1169 - -
Gma09g01592 1171 MobiDBLite consensus disorder prediction 145 180 - -
Gma09g01592 1171 MobiDBLite consensus disorder prediction 474 504 - -
Gma09g01592 1171 Pfam Protein kinase domain 860 1162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01592 1171 CDD PKc_DYRK_like 860 1162 - -
Gma09g01592 1171 MobiDBLite consensus disorder prediction 283 298 - -
Gma09g01592 1171 Gene3D Transferase(Phosphotransferase) domain 1 914 1162 - -
Gma09g01592 1171 ProSitePatterns Serine/Threonine protein kinases active-site signature. 986 998 IPR008271 GO:0004672|GO:0006468
Gma09g01592 1171 SUPERFAMILY Protein kinase-like (PK-like) 849 1164 IPR011009 -
Gma09g01592 1171 PANTHER DUAL SPECIFICITY PROTEIN KINASE 2 1169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01592 Gma-Chr9 41170356 41179134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01592 859 1157 MAP Kinase Gene Family AT5G19010 29.968 2.71e-28 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Gma09g01592 Pkinase 7.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01592 - - gmx:100798608 2325.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01765 16 38839750 38846917 Gma09g01592 09 41170356 41179134 GST
Gma05g02407 05 44836294 44847628 Gma09g01592 09 41170356 41179134 PCT
Gma08g00546 08 4467153 4478312 Gma09g01592 09 41170356 41179134 PCT
Gma09g01592 09 41170356 41179134 Gma05g02407 05 44836294 44847628 PCT
Gma09g01592 09 41170356 41179134 Gma08g00546 08 4467153 4478312 PCT