Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01585 ATGGCTAATTTTGAGAAAGATGAGGTGCCAATTTTCTCAGATATTCATCCTAAACTATCAAATGAACTTGTTGATTCTAAATTCCCAAGGCGTGTACCTAGGACTCGAAGTGTGTCAATTTCTATTCCTGCGACACTCACAGAGCCATATGAAAGAGATACTAATCTTGTGGGATACACTGGTCCCCTACGGAGTCAGAGAAAAACTCCATTCGATCAGATGAGTGGTCCATTGTATGTTACCAATAAACCTGGAAACCTTTTCCGGCAGAATAGAGTGGCACCAGAGTACCAAACAGCAGAAAGTAAGACAGAAAATTTTCCTTCATGCTGTGGCGTGGGTGAAAATGATTTGCAGAACAACTATGCTGGCAAGAATGAACATTTAATTAGGTCCGGTCCCCTTGGAATGTGTAATGATCCGTATTGTACAACTTGCCCAACTTACTTCAAGGCTACTCAACAAATGACTTCAAAAGCTTCGGGTATATTCAATCCTAAGTTTCGCAATACCCTCTATGGGGATGCTAGGGATTGGGCAAGAAGACTTTTTGATTTCTTGATTCCACTTGTTCCTAGAGTTATGAATCCTCATAATAGACTTGTACAACAATGGAATAAATTTTTTGCAATTTGTTGCTTGGTGGCAATTTTTGTGGATCCATTATTTTTCTTCTTGCTCTCTGTGCAGAAGAACCATCAATGTATTGTTATAGACTGGACTATGACAAAAATGCTGGTTGTACTTAGAAGCATGAATGATTTCATACACTTCCTAAACATTGTTCTTCAGTTTAGGTTGGCTTATGTGGCTCCTGAGTCGAGGGTGGTTGGTGCTGGGGAGTTAGTTGACCATCCTAAGAAAATAGCCCTTCACTACCTTCGGACATCTTTTGTTATTGACTTATTTGTTGTACTTCCACTTCCTCAGATATTCATATTGTTTGTCCAACCGAAACACTTGGGGTCATCAGGAGCAAACTATGCAGGTTTCTTCCTACCGAAACACTTGCGTATCGTGATCATTGTTCAGTATATTCCCAGATTGTGTAGGTTTCTTCCTATGCTAATTTCTCCAACAGGATTAATATTTGAGTCACCATGGGCAAGTTTCTTTATAAATCTTTTTACCTTTATGCTATCTGGCCATGTTGTTGGATCATGGTGGTACCTCTTCGGTTTGCAGAGGGTTAATCAGTGTCTACGAGATGTCTGCCAGAAAGTAATCAAAGAACATAATGAATGCGCAAAATTCATTGATTGTGGGCATGGTCAAGCTGAAGAAAATCAAAATAACCCAACCTTGCATAATTGGAGGAGCAATTCTGAAGCAAGTTCTTGTTTTACTGAAGATGGTTTTCCATATGGGATCTATAATAAAGCTGTTAACCTTACTGCAGATCAAAATGTGATCACTAGATATGTATATTCATCATTTTGGGGATTCCAGcaaattagtaCTCTGGCTGGCAATTTAACCCCCAGCTATTATGTTTGGGAAGTCATCTTTACCATGGCAATCATAGGATCAGGACTGTTGTTGTTTGCCCTTCTCATTGGAAACATACAAAACTTTCTTCAGGCTCTTGGGCGCAGGAGGCTAGAAATGTCACTTAGACGATGTGATGTTGAGCAATGGATGAGCCATCGGCGCTTAGCGGAAGATCTGAGAAGGAGAGTGCGACAGGCTGAACGATATAACTGGGCCGCAACAAGAGGGGTGAATGAAGAAATGCTCCTGGAGAATTTGCCAGAAGACCTCCAAAGGGACATCAGACGTCATCTCTTTACATTTATTAAGAAAGTTCGAATTTTCGCCTTGTTGGATGAGCCTATCTTGGATGCCATATGTGAGAGGCTAAGACAAAAAACATATATCAAAGGGAGCAAAATTTTTTATGATGGCGGTTTGGTAGAGAAGATGGTTTTCATTGTGCGTGGAAAATTGGAGAGTGTTGGCGAAGATGGAATTAGTGCTCCCCTTTATGAAGGAAGTGTTTGTGGTGAAGAACTTCTGACATGGTGTCTTGAGCATCCTTTAGCAAGCAAAGGTTGTGGAAAAGCAAGGATTCCAAGGCAAAAGTTGGTTAGTAACCGGACAGTAGGCTGCTTAACGAATGTGGAGGCATTTTCCCTTAGAGCAGCAGACCTTGAAGAAGTTACAAGCCTTTTTGCAAGATTCTTTCGGAGTCCCCGTGTTCAAGGAGCCATAAGGTATGAATCACCTTACTGGAGATGCTTTGCAGCAACAAGCATCCAGGTTGCATGGAGATACAGGATGAAATGTCTTAGTCGTGCTGACACTACACGATCAAATGAAATATCAAAGATTTACAATTCACTGTAA 2346 0.4071 MANFEKDEVPIFSDIHPKLSNELVDSKFPRRVPRTRSVSISIPATLTEPYERDTNLVGYTGPLRSQRKTPFDQMSGPLYVTNKPGNLFRQNRVAPEYQTAESKTENFPSCCGVGENDLQNNYAGKNEHLIRSGPLGMCNDPYCTTCPTYFKATQQMTSKASGIFNPKFRNTLYGDARDWARRLFDFLIPLVPRVMNPHNRLVQQWNKFFAICCLVAIFVDPLFFFLLSVQKNHQCIVIDWTMTKMLVVLRSMNDFIHFLNIVLQFRLAYVAPESRVVGAGELVDHPKKIALHYLRTSFVIDLFVVLPLPQIFILFVQPKHLGSSGANYAGFFLPKHLRIVIIVQYIPRLCRFLPMLISPTGLIFESPWASFFINLFTFMLSGHVVGSWWYLFGLQRVNQCLRDVCQKVIKEHNECAKFIDCGHGQAEENQNNPTLHNWRSNSEASSCFTEDGFPYGIYNKAVNLTADQNVITRYVYSSFWGFQQISTLAGNLTPSYYVWEVIFTMAIIGSGLLLFALLIGNIQNFLQALGRRRLEMSLRRCDVEQWMSHRRLAEDLRRRVRQAERYNWAATRGVNEEMLLENLPEDLQRDIRRHLFTFIKKVRIFALLDEPILDAICERLRQKTYIKGSKIFYDGGLVEKMVFIVRGKLESVGEDGISAPLYEGSVCGEELLTWCLEHPLASKGCGKARIPRQKLVSNRTVGCLTNVEAFSLRAADLEEVTSLFARFFRSPRVQGAIRYESPYWRCFAATSIQVAWRYRMKCLSRADTTRSNEISKIYNSL 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01585 781 CDD CAP_ED 604 720 IPR000595 -
Gma09g01585 781 ProSiteProfiles cAMP/cGMP binding motif profile. 604 682 IPR000595 -
Gma09g01585 781 Gene3D Helix hairpin bin 532 596 - -
Gma09g01585 781 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 20, CHLOROPLASTIC-RELATED 7 768 - -
Gma09g01585 781 Pfam Ion transport protein 205 532 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Gma09g01585 781 SUPERFAMILY Voltage-gated potassium channels 197 532 - -
Gma09g01585 781 Gene3D - 206 529 - -
Gma09g01585 781 SUPERFAMILY cAMP-binding domain-like 533 727 IPR018490 -
Gma09g01585 781 SMART cnmp_10 604 739 IPR000595 -
Gma09g01585 781 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 7 768 - -
Gma09g01585 781 Gene3D Jelly Rolls 602 726 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01585 Gma-Chr9 41098132 41111984 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01585 5 684 Ion Channels AT3G17700 58.978 0.0 786
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01585 K05391 - gmx:100795955 1596.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g01585 09 41098132 41111984 Gma09g01585 09 41098132 41111984 ECH
Gma16g01757 16 38772752 38783744 Gma09g01585 09 41098132 41111984 GST