Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01584 ATGGCTAATTTTGAAAATGACAAGCTGCTGATGCTCTCAGATACAGATGCACAACCATATGATGAACCCTTGGATGCTAAATTTCGAAGGACAGTAACCAGGACACAAAGTGCATCAATTTCTATTTCTATGAGTTCCTTGGAGTCATATGATAAAGAAACTAGCCTTGTGGGACATACTGGTCCACTTCAGAGCAAGAGAAAAACACCCTTTATGCAGATGAGTGGTCCATTATATGCTACCACTGGAACTGGAAATCCTCTGCAGAAGCATATTGTATCTGGAAACAAAGCAGAGGAGAGAAAGACAGATAATTTTGCTACTCTCCGTGACACAGGTTCAAATTACTGGAATAATGACTATGATAGAAAAAATGAACACTTACTAAGGTCTGGGCAACTGGGAATGTGCAATGATCCTTATTGTACTACTTGCCCTACCTACTTCAATGCTTCTCAGCAAAGAAATCCAAAACCTTCGACTAGATGGGATCCAAAGTTCCATAATGCTCTTTATGGGGATGCCAAGAGTTTTGTGAGAAAACTTCTTTCTTTCTGCTATTCGTATGTTCCTGGAGTTATGAACCCTCATGCTAAAGTCGTACAAAAATGGAACAAATTTTTGGCCATTTTTTGCTTGATTGCTATTTTTGTGGATCCATTATTTTTCTTCTTACTCTATGTGGAGAAGGATAATAAATGTATTGTTATCAACTGGCCTTTGACAACAGCACTTGTTTTATTTAGATGTGTGACTGATTTTGTTTATTTCCTTAACATTCTTCTCCAGTTTAGGTTAGCTTATGTTTCTCGTGAGTCGAGGGTGGTTGGTGCTGGAGATTTGGTTGACCATCCAAAGAGGATTGCTCTTCATTACCTAAAGGGTTATTTCCTTATTGACTTATTTGTTGTATTTCCTCTTCCTCAGATAATGATATTGTTTGTCCTACCAAATTCCTTGGAGGGAGCAAATTATGCCAAGAATCTTCTCCGTGCAGCGATCTTAGTGCAATATATCCCCAAGTTATTCAGGTTTCTGCCACTGCTAATTGGCCAATCTCCCACAGGATTCATATTTGAGTCAGCCTGGGCAAATTTCATTATAAACCTTCTCATTTTTATGCTTGCTAGTCATGTTGTTGGCTCTTGCTGGTACCTCTTCGGTCTTCAGAGGGTTAACCAGTGTCTGCGGGATGCCTGCCATAGTTCCAATATACCTGGATGCATGAAGTTCATTGATTGTGGACGTGGCCATGGAAAGAATCAGCCTAGCTTAAGATCAGATCAGTGGATCAACAATACCGATGCCGTTGCTTGTTTGGATCCCTCTCCTGATGGTTTCTCTTACGGGATTTATGAGAATGCTGTACCACTTACTATAGAAACTAACATTGTCAATAAATATGTGTATTCTCTTTTTTGGGGATTCCAGCAAATCAGTACTCTAGCTGGTAATCTAGAACCTAGCTATTTTGTGTGGGAAGTCCTTTTTACTATGGCCATCATAGGAATGGGACTCTTGCTTTTTGCAATTCTTATTGGAAACATACAGAACTTTCTACAGGCTCTTGGGCGGAGGAAGCTGGAAATGCAACTTAGAGGCCGGGATGTTGAGCAATGGATGAGCCATCGGCGCTTACCAGAAGATCTAAGAAGGAGAGTAAGACAGGCTGAACGGTATAATTGGGCTGCAACAAGGGGGGTGAATGAAGAAATGCTTATGGAGAATTTGCCAGAAGATCTTCAGAGAGACATAAGACGTCATCTCTTCAAATTTGTTAAGAAAATTCGGCTTTTTGCTCTGATGGATGAACCTATCTTAGATGCCATTTGTGATAGACTAAGACAAAAGACATACATCAAAGGAAGTAAAATTCTAAGTCAGGGTGGTCTAGTAGAGAAGATGGTATTCGTGGTGCGTGGCAAATTGGAAAGCATTGGAGAAGATGGAACTAGAATTCCTCTATCTGAAGGGGATTCTTGTGGTGAAGAACTTCTGACATGGTATCTTGAGCATTCTTCAGTCAGCACAGATGGTAGAAAAGTAAGGCTTCCAGGACAGAGATTGGTTAGCAACAGGACAGTAAGGTGCTTAACAAATGTGGAGTCATTTTCACTCTCTGCTTCGGACATTGAAGAAGTCACAATCCTTTTCACAAGATTCTTGCGGAGTCCATGCGTTCAAGGAGCTCTAAGGTATGAGTCACCTTATTGGAGATCCCTTGCTGCGACCCGCATTCAAGTTGCATGGAGATACAGGAAGAAACGTCTAAGTCGTGTTAATTCCTCACCATCAGATTAA 2301 0.4076 MANFENDKLLMLSDTDAQPYDEPLDAKFRRTVTRTQSASISISMSSLESYDKETSLVGHTGPLQSKRKTPFMQMSGPLYATTGTGNPLQKHIVSGNKAEERKTDNFATLRDTGSNYWNNDYDRKNEHLLRSGQLGMCNDPYCTTCPTYFNASQQRNPKPSTRWDPKFHNALYGDAKSFVRKLLSFCYSYVPGVMNPHAKVVQKWNKFLAIFCLIAIFVDPLFFFLLYVEKDNKCIVINWPLTTALVLFRCVTDFVYFLNILLQFRLAYVSRESRVVGAGDLVDHPKRIALHYLKGYFLIDLFVVFPLPQIMILFVLPNSLEGANYAKNLLRAAILVQYIPKLFRFLPLLIGQSPTGFIFESAWANFIINLLIFMLASHVVGSCWYLFGLQRVNQCLRDACHSSNIPGCMKFIDCGRGHGKNQPSLRSDQWINNTDAVACLDPSPDGFSYGIYENAVPLTIETNIVNKYVYSLFWGFQQISTLAGNLEPSYFVWEVLFTMAIIGMGLLLFAILIGNIQNFLQALGRRKLEMQLRGRDVEQWMSHRRLPEDLRRRVRQAERYNWAATRGVNEEMLMENLPEDLQRDIRRHLFKFVKKIRLFALMDEPILDAICDRLRQKTYIKGSKILSQGGLVEKMVFVVRGKLESIGEDGTRIPLSEGDSCGEELLTWYLEHSSVSTDGRKVRLPGQRLVSNRTVRCLTNVESFSLSASDIEEVTILFTRFLRSPCVQGALRYESPYWRSLAATRIQVAWRYRKKRLSRVNSSPSD 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01584 766 CDD CAP_ED 598 714 IPR000595 -
Gma09g01584 766 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 4 763 - -
Gma09g01584 766 SUPERFAMILY Voltage-gated potassium channels 199 526 - -
Gma09g01584 766 Pfam Ion transport protein 206 525 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Gma09g01584 766 Gene3D - 205 523 - -
Gma09g01584 766 ProSiteProfiles cAMP/cGMP binding motif profile. 598 666 IPR000595 -
Gma09g01584 766 Gene3D Jelly Rolls 596 720 IPR014710 -
Gma09g01584 766 SMART cnmp_10 598 733 IPR000595 -
Gma09g01584 766 Gene3D Helix hairpin bin 525 590 - -
Gma09g01584 766 SUPERFAMILY cAMP-binding domain-like 526 717 IPR018490 -
Gma09g01584 766 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 4 763 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01584 Gma-Chr9 41087987 41094891 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01584 5 676 Ion Channels AT3G17700 61.267 0.0 812
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01584 K05391 - gmx:100795427 1550.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g01584 09 41087987 41094891 Gma09g01584 09 41087987 41094891 ECH