Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01583 ATGGCTCATTTTGAAAAAGATGAGGTGCCAATGCTGTCAGAAACACATGCTCAACTATCTGATGAAGTTGTGGATTCTAATTTCCGAAGGCTTGTATCTAGGACACAAAGTGCTTCAATTTCTATTCCTATGGCCTCCTTGGAATCATATGAGAAAGAAACTAGTCTTGTGGGACATACTGGTCCACTTCGTAGTGTGAGAAAAACCCCCTTTGTGCAGATGAGTGGTCCACTGTATGCTACCAATGGAACTGGAAATCTTTCACGACAGAATATAGTTGCGACACGAACCAAAGTAGTGGAGAGCAAGACAGAAAAGTTTTCTACTTTCAATGGCACAGATGAAAATCATTGGGATAACGACTACAATAGAAAGAATGAGCACTTAATGAGGTCTGGGCAACTTGGAATGTGTAATGATCCTTATTGTACTACTTGCCCCACTTATTTCAAGGCTTCTCAGCCAAGAGCCCGGAGAACTTCAGCTATATTTGATCCCAAGTTCCACAATAATCTTTATGGGGATGCCAAGGGTTTTGGAAGAAAACTTTATTCCTTCTTCTCTTCATATGTTCCTGGAGTTATGAATCCTCATGCAAAATTTGTACAACAATGGAACAAGATTTTGGCCATTTTTTGCTTGGTGGCAATTTTTGTTGATCCATTATTTTTTTTCTTAATCTATGTGAAGAAGGATGATAAATGTATTGCTATCAATTGGACAATGACAACAACACTTGTTTTATTTAGAAGCATTAATGATTTGATATATTTCTTTAACATTCTTGTACAGtttAGGTTGGCTTATGTTTCTCCTGAGTCAAGGGTAGTAGGTGCTGGAGATTTAGTTGATCATCCCAAGAAAATTGCTCTTAATTATCTGAAGGGTTTTTTTTTCATTGACCTATTTGTTGTATTGCCTCTACCTCAGATAATGATATCATTTGTCCTACGAAAGTACATGGGAATATCAGGAGCAAATTTTGCTAAAAATCTTCTGCGTGCAGCAATCCTTTTGCAGTATTTTCCCAGATTATTCAGGTTTCTGCCTCTGCTAATTGGTCAGTCTCCTACAGGATTCATATTTGAGTCAGCCTGGGCAAATTTCATTATAAATCTTCTTTTTTTTATGCTATCTGGCCATGTTGTTGGTTCTGGCTGGTACCTCTTTGGTCTGCAGAGGGTTAATCAATGCTTGCGAAAGGCCTGCCAACATTCTAATATTACTGGATGCTCAGCATTTATTGATTGTGGCAGTGACCGTGCATCTGACCAGTCAGAACTGTGGAACAAAAATGTAAATGCCACTGCTTGTTTGGATTCCAGTTCCGGTGCTTTTCCATATGGGATCTATGTACATGCTGTACCACTTACTATAGAAACTAGGGTGGTCAAAAAATATGTATTTGCACTGTTTTGGGGCTTCCAGCAAATCAGTACTCTGGCTGGTAATCAAACCCCAAGCTATTTTGAGTGGGAAGTACTTTTTACAATGGCCATCATAGGATTGGGACTCTTGCTTTTTGCACTTCTCATTGGAAACATACAAAACTTTCTTCAGGCTCTTGGACGCAGGAGGCTAGAAATGCAACTTAGAGGTCGTGATGTTGAGCAATGGATGAGCCATCGTCGCTTACCCGAAGATCTAAGAAGGAGAGTACGTCAGGCTGAACGATATAGTTGGGCAGCAACAAGGGGAGTGAATGAAGAAATACTTCTGGAGAATTTGCCAGAAGATCTCCAGACAGACATAAGACGTCATCTCTTCAAATTTGTTAAAAAAGTTCGAATCTTTTCCCTGATGGATGAGCCTATCTTAGATGCCATTTGTGAGAGACTAAAACAAAAGACGTACATCAAAGGAAGTAAAGTTTTGAGTCAGGGTGGTCTTGTAGAGAAGATGGTCTTTGTTGTACGTGGGAAATTGGAGAGCTTTGGAGATGATGGAACTATAGTTCCCTTATCTGAAGGGGATGCTTGTGGTGAAGAACTTCTGACATGGTATCTTGAGCATTCTTCCGTAAGCACAGATGGTAAAAAATTAAGGGTTCAAGGGCAGAGGTTTCTGAGCAACAGGACAATAAGATGCTTAACAAATGTGGAGGCATTTTCACTGCACGCTGCAGACCTTGAGGAACTCACAATTCTTTTCACAAGATTCTTGCGGAACCCTCATGTTCTAGGAGCACTAAGGAATGTATCACCTTATTGGAGATCCCTTGCAGCAAACCGTATTCAAGTTGCATGGAGATACAGGAAGAAGCGTCTAAGTCGTGCTAATACCTCGCAATCAAATCAAACATTGATGTCATAG 2313 0.4008 MAHFEKDEVPMLSETHAQLSDEVVDSNFRRLVSRTQSASISIPMASLESYEKETSLVGHTGPLRSVRKTPFVQMSGPLYATNGTGNLSRQNIVATRTKVVESKTEKFSTFNGTDENHWDNDYNRKNEHLMRSGQLGMCNDPYCTTCPTYFKASQPRARRTSAIFDPKFHNNLYGDAKGFGRKLYSFFSSYVPGVMNPHAKFVQQWNKILAIFCLVAIFVDPLFFFLIYVKKDDKCIAINWTMTTTLVLFRSINDLIYFFNILVQFRLAYVSPESRVVGAGDLVDHPKKIALNYLKGFFFIDLFVVLPLPQIMISFVLRKYMGISGANFAKNLLRAAILLQYFPRLFRFLPLLIGQSPTGFIFESAWANFIINLLFFMLSGHVVGSGWYLFGLQRVNQCLRKACQHSNITGCSAFIDCGSDRASDQSELWNKNVNATACLDSSSGAFPYGIYVHAVPLTIETRVVKKYVFALFWGFQQISTLAGNQTPSYFEWEVLFTMAIIGLGLLLFALLIGNIQNFLQALGRRRLEMQLRGRDVEQWMSHRRLPEDLRRRVRQAERYSWAATRGVNEEILLENLPEDLQTDIRRHLFKFVKKVRIFSLMDEPILDAICERLKQKTYIKGSKVLSQGGLVEKMVFVVRGKLESFGDDGTIVPLSEGDACGEELLTWYLEHSSVSTDGKKLRVQGQRFLSNRTIRCLTNVEAFSLHAADLEELTILFTRFLRNPHVLGALRNVSPYWRSLAANRIQVAWRYRKKRLSRANTSQSNQTLMS 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01583 770 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 4 763 - -
Gma09g01583 770 Gene3D - 206 522 - -
Gma09g01583 770 SUPERFAMILY cAMP-binding domain-like 525 719 IPR018490 -
Gma09g01583 770 Gene3D Jelly Rolls 595 719 IPR014710 -
Gma09g01583 770 SUPERFAMILY Voltage-gated potassium channels 198 525 - -
Gma09g01583 770 SMART cnmp_10 597 732 IPR000595 -
Gma09g01583 770 CDD CAP_ED 597 713 IPR000595 -
Gma09g01583 770 Pfam Ion transport protein 207 525 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Gma09g01583 770 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 4 763 - -
Gma09g01583 770 ProSiteProfiles cAMP/cGMP binding motif profile. 597 665 IPR000595 -
Gma09g01583 770 Gene3D Helix hairpin bin 524 589 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01583 Gma-Chr9 41070442 41079269 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01583 2 675 Ion Channels AT3G17700 60.767 0.0 815
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01583 K05391 - gmx:100794895 1516.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g01583 09 41070442 41079269 Gma09g01583 09 41070442 41079269 ECH
Gma16g01756 16 38744244 38753760 Gma09g01583 09 41070442 41079269 GST