Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01582 ATGAAAGAGAATCAACAAGGAAAAGTGGCTAATTTTGAAAAACATGGGGAGCCAGCGCCATCAGAAACACATGCACAACATGATGAACTTGAGAATTCTAGATTTGGGAAAGTGATATCAAGGACAAAAAGTGCATCAATTTCTATTCCTATGGTCTCCATGGAGCCATATGAAAGAGAAACTAGTCTTGTGGGACATACTGGTCCACTTCCTAGTGTGAGAAAATCCCCCATAATGCATGTGAATGGTTCACTATATGCTACCAATGGAACTGAAAATCTATTGCATCAGAGTATATTTGTGAAAGGAAACAAAGTAGTGGAGAGCAAGACAGAAAAAATTTCTACTCTTGACAGGAAAGATGAAAATCATTGGAATAACAACTATGATAGAAAGAATGAACACTTGCTGAGATCTGGGCTACTGGGAATGTGTAATGATCCTTATTGTACTACTTGCCCCACTTACTTCAGGGTCTCTCTGCAAAGATTTTCAAAAGCTTCCACTGTCTTTGATCCCCAGTTTCACTTCCACAATGCTCTTTATGGGGATGCCAAGGGTTTGGGGAGAAAAATTATGTCTTTCTTCTCTTCATATGTTCCTGGAGTTATAAATCCTCACTCAAAAGTTGTACAACAATGGAACAAATTTTTGGCCATTTTTTGCATGGTGGCAATTTTTGTGGATCCATTATTTTTTTTCTTAATCTATGTGCAGAAGGGTGGTAAATGTATATCTATCGACTGGGACATGACAAAAGCACTTGTTGTAGTAAGAACCATGAATGATGTTATATATTTCTTGAACATTCTTCTCCAGTTTAGGCTGGCCTATGTTTCTCCTGAGTCAACAGTGGTTGGTGCTGGAGATTTAGTTGATCATCCCAAGAAAATTGCTCTTCATTACTTGAAGGGTTATTTTCTTTTTGACTTGTTTGTTGTATTTCCTCTTCCTCAGATAATGATATTTTTGGTCCTACCAAAACACTTGGGGACATCAGGAGCAAACTATGCTAAGAATCTTCTGCGTGCAGTGATCCTTGTGCAGTATATTCCCAAATTATTCAGGATTCTGCCTCTGCTAATTGGACAATCTCCAACAGGATTTATATTTGAGTCAGCTTGGGCAAATTTCATTATAAATCTTCTCATTTACATGCTTGCTAGCCATGTTGTTGGATCTTGTTGGTACCTCTTTGGTCTACAGAGGGTTAATCAATGCTTGCGAGATGCCTGCGGTAATTCTGATATTGATAGATGCATGACAGTCATTGATTGTGGAAGACATGGTCATACCAGAAACAACTATTCAGACCAAACATCATCTCTGTGGAGCAACAATTCAGATGCCATTGCTTGTTTGAATCCCTCCTCTAGTGGTTTCCGTTATGGGATCTATGTCAATGGTGTACCTCTTACTATAGAAACTAGTGTGGCTAACAAATATATTTATTCACTATTTTGGGGATTCCAGCAAATCAGTACTCTGGCTGGTAGTTTAACCCCGAGCTATTTTTGGGGGGAAGTCCTGTTTACAATGGCCATCATAGGATTGGGACTCTTGCTTTTTGCGGTTCTTGTTGGAAACATACATAACTTTCTCCAAGGTCTTGGACGGAGAAGGCTAGAAATGCAACTTAGAGGCCGCGATGTTGAGCAATGGATGAGCCATCGTCGCTTACCAGAAGATATAAGAAGGAAAGTACGACAGGCTGAACGGTATAATTGGGCTGCAACCAAGGGAGTGAATGAAGAAATGCTAATGGAGAATTTGCCAGGAGATCTCCAGAGAGAGATACGACGCCATCTCTTCAAATTTGTAAAGAAAGTCCGAATTTTCACCCTGATGGATGAGCCTTTCTTAGATTCCATTTGTCAAAGATTGAGACAGAAGACATACATCAAAGGAAGTATAATTTTGAGTCAAGGTTGTCTAGTAGAGAAGATGATCTTTATTGTGCGTGGAAAATTGGAGAGCATTGGAGAAAATGGAATTGGAGTTAGCTTGTCTGAAGGAGATGCTTGTGGTGAAGAACTTCTGACATGGTATCTTGAACATTCTTCTGTAAGCAAAGATGGTAAAAGAGTAAGGCTTCCAGGACAGAGGTGGCTTAGCAACAGGACAGTAAAGTGCTTAACAAATGTGGAGGCTTTTTCAATCCGAGCTGAAGATCTTGAAGAAGTCACAACCCGATTCATGAGATTCTTGCGGAATCTTCGTGTTCAAGGATCCCTAAGGTATGAATCACCTTACTGGAGATCCTTGGCAGCAGTTCGAATCCAGGTTGCATGGAGATACAGGAAGAAACCAATGGCACAACACGTGTCAAGTCCCAATCTTACAAGAACCTTCCTTCCTACCGAAAGTCCCGTCACGACACGTGAGCAGTCACATCCGTCACGTGTCACCTTTTCATCGACCATGGGAAGATCTTTCGGCACCGCACTTTCTGGTATCTTCACGCGCAATCCCCATCCCACCGTCCATTCTCTCACACGCTCGAGCCATCGTAGCCGTCGCCCCCTCACCCGTCCCCAACTCCGCCACGCATCCAAATGA 2559 0.4154 MKENQQGKVANFEKHGEPAPSETHAQHDELENSRFGKVISRTKSASISIPMVSMEPYERETSLVGHTGPLPSVRKSPIMHVNGSLYATNGTENLLHQSIFVKGNKVVESKTEKISTLDRKDENHWNNNYDRKNEHLLRSGLLGMCNDPYCTTCPTYFRVSLQRFSKASTVFDPQFHFHNALYGDAKGLGRKIMSFFSSYVPGVINPHSKVVQQWNKFLAIFCMVAIFVDPLFFFLIYVQKGGKCISIDWDMTKALVVVRTMNDVIYFLNILLQFRLAYVSPESTVVGAGDLVDHPKKIALHYLKGYFLFDLFVVFPLPQIMIFLVLPKHLGTSGANYAKNLLRAVILVQYIPKLFRILPLLIGQSPTGFIFESAWANFIINLLIYMLASHVVGSCWYLFGLQRVNQCLRDACGNSDIDRCMTVIDCGRHGHTRNNYSDQTSSLWSNNSDAIACLNPSSSGFRYGIYVNGVPLTIETSVANKYIYSLFWGFQQISTLAGSLTPSYFWGEVLFTMAIIGLGLLLFAVLVGNIHNFLQGLGRRRLEMQLRGRDVEQWMSHRRLPEDIRRKVRQAERYNWAATKGVNEEMLMENLPGDLQREIRRHLFKFVKKVRIFTLMDEPFLDSICQRLRQKTYIKGSIILSQGCLVEKMIFIVRGKLESIGENGIGVSLSEGDACGEELLTWYLEHSSVSKDGKRVRLPGQRWLSNRTVKCLTNVEAFSIRAEDLEEVTTRFMRFLRNLRVQGSLRYESPYWRSLAAVRIQVAWRYRKKPMAQHVSSPNLTRTFLPTESPVTTREQSHPSRVTFSSTMGRSFGTALSGIFTRNPHPTVHSLTRSSHRSRRPLTRPQLRHASK 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01582 852 ProSiteProfiles cAMP/cGMP binding motif profile. 612 680 IPR000595 -
Gma09g01582 852 MobiDBLite consensus disorder prediction 781 852 - -
Gma09g01582 852 SUPERFAMILY cAMP-binding domain-like 540 739 IPR018490 -
Gma09g01582 852 PANTHER CYCLIC NUCLEOTIDE-GATED CATION CHANNEL PROTEIN 9 770 - -
Gma09g01582 852 Gene3D - 209 536 - -
Gma09g01582 852 MobiDBLite consensus disorder prediction 1 37 - -
Gma09g01582 852 Gene3D Jelly Rolls 610 734 IPR014710 -
Gma09g01582 852 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 9 770 - -
Gma09g01582 852 MobiDBLite consensus disorder prediction 781 831 - -
Gma09g01582 852 CDD CAP_ED 612 739 IPR000595 -
Gma09g01582 852 SUPERFAMILY Voltage-gated potassium channels 206 540 - -
Gma09g01582 852 MobiDBLite consensus disorder prediction 1 36 - -
Gma09g01582 852 SMART cnmp_10 612 744 IPR000595 -
Gma09g01582 852 Gene3D Helix hairpin bin 539 604 - -
Gma09g01582 852 MobiDBLite consensus disorder prediction 832 852 - -
Gma09g01582 852 Pfam Ion transport protein 216 537 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01582 Gma-Chr9 41051725 41067580 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01582 28 690 Ion Channels AT3G17700 59.820 0.0 784
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01582 K05391 - gmx:112997782 1535.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g01582 09 41051725 41067580 Gma09g01582 09 41051725 41067580 ECH
Gma16g01755 16 38729904 38739906 Gma09g01582 09 41051725 41067580 GST