Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01577 ATGGCTAACAACGTTGTTTTTGTTGTTCCTAAGGTAGCTCCTGGTTCTCTACCTTCATTACCCATAACAAACAATGCTCTCTACCTTCATCTGAATTTCTGCCAAACCAAAAACAGAACAGCCTCATTCCCTTCTTCCTCATCAATCCTCAGAAGCAAAGCTAGTTGTTCTGTGTTAGCGTGTCTCCCTCCTGCTTCTTCTGAATCCTCAACCTCATCTTCCACTGCTAAACCCTCTTTTCCTTCTCCTCCAACTAAGCTTTATGTCAGTGTCAAGCTGGTGATGGATAGAATTGCAAATGGACCAAGAGGGTTTGCTTTTCTTCGTTATGCAACTGAAGAAGAGTCTCAGAAGGCTATTGAGGGAATGCATCGAAAGTTCTTGGATGGTAGGGTCATATTTGTGGAAGTTGCCAAACCGAGATCAGAGTTACCGCAAAGGCACAAGGAAGACACTAGATTGTAA 465 0.4323 MANNVVFVVPKVAPGSLPSLPITNNALYLHLNFCQTKNRTASFPSSSSILRSKASCSVLACLPPASSESSTSSSTAKPSFPSPPTKLYVSVKLVMDRIANGPRGFAFLRYATEEESQKAIEGMHRKFLDGRVIFVEVAKPRSELPQRHKEDTRL 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01577 154 PANTHER NUCLEOLAR PROTEIN 8 89 151 - -
Gma09g01577 154 MobiDBLite consensus disorder prediction 63 81 - -
Gma09g01577 154 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 55 140 IPR000504 GO:0003723
Gma09g01577 154 Gene3D - 71 153 IPR012677 -
Gma09g01577 154 MobiDBLite consensus disorder prediction 63 84 - -
Gma09g01577 154 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 89 133 IPR000504 GO:0003723
Gma09g01577 154 SUPERFAMILY RNA-binding domain, RBD 89 147 IPR035979 GO:0003676
Gma09g01577 154 PANTHER ORGANELLE RRM DOMAIN-CONTAINING PROTEIN 6, CHLOROPLASTIC 89 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01577 Gma-Chr9 40956834 40959713 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01577 - K13195 gmx:100305561 211.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g01577 09 40956834 40959713 Gma09g01577 09 40956834 40959713 ECH
Gma16g01751 16 38656635 38659864 Gma09g01577 09 40956834 40959713 GST