Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01575 ATGTCACCGGTTGGATTACCACCTGGCTTTAGGTTCCATCCAACCGATGAAGAGCTTGTCAACTATTATCTCAAGAGAAAGATCAATGGCCAAGAAATTGAACTTGATATCATTCCTGAAGTTGATCTCTACAAATGTGAACCATGGGAATTAGCAGAGAAATCATTTTTGCCAAGTAGAGACCCAGAGTGGTATTTTTTTGGACCCCGGGATAGGAAATACCCGAATGGGTTTAGGACAAATAGAGCAACTCGTGCAGGGTACTGGAAGTCCACTGGGAAAGACAGAAGAGTTTCATGCCAAAGCAGACCTATTGGCATGAAGAAGACTTTGGTGTACTATAGAGGCAGAGCTCCTCAAGGGATCAGAACTGACTGGGTAATGCATGAGTATCGCCTTGATGACAAAGAGTGTGAAGACACCACTGGATTACAGGATACTTATGCATTGTGTCGTGTGTTCAAGAAAAATGGAATCTGTTCTGATATTGAAGAGCAAGGACAATGTAATATATCACTAATTGAAAGCTCCCAAACCATAATTAATGAGTGTGAAACCATGTCACCTGACATACCAGGGGCATCATCATCATGCTTGGAAGAGGAGGACAAAGATGATTCATGGATGCAGTTCATTACAGAAGATGCATGGTATTCTTCTAATGCAGCAATGGTTGGTAGTGAAGAAGTGTCACATGTTACATTTACAAACTAA 714 0.4146 MSPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVSCQSRPIGMKKTLVYYRGRAPQGIRTDWVMHEYRLDDKECEDTTGLQDTYALCRVFKKNGICSDIEEQGQCNISLIESSQTIINECETMSPDIPGASSSCLEEEDKDDSWMQFITEDAWYSSNAAMVGSEEVSHVTFTN 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01575 237 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Gma09g01575 237 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Gma09g01575 237 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 1 237 - -
Gma09g01575 237 Gene3D NAC domain 15 159 IPR036093 GO:0003677|GO:0006355
Gma09g01575 237 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 237 - -
Gma09g01575 237 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01575 Gma-Chr9 40923356 40926774 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01575 1 226 NAC Transcription Factor Family AT3G17730 75.934 1.07e-132 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma09g01575 NAM 9.3e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01575 - - gmx:100788036 504.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g01575 09 40923356 40926774 Gma09g01575 09 40923356 40926774 ECH
Gma16g01749 16 38644076 38647589 Gma09g01575 09 40923356 40926774 GST