Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01563 ATGGCAACCCACGCAGGCACGCTTCTCTCCCTTGCGCCGCCTCACAAAAGGTTATTGGCCTATTATTGTCTGAAGATGGTTGATGGCCATGAGACTGATAAGAACATTGAGGTGTGGAAAATCAAGAAATTGATCAAAGCTCTTGAGGCTGCTAGAGGAAATGGGACAAGTATGATTTCCCTTATCATGCCTCCACGTGATCAAATATCTCGTGTCACTAAGATGCTTGGTGATGAGTTTGGAACTGCATCAAACATCAAAAGCAGGGTGAATCGACAGTCAGTTCTTGGTGCAATCACTTCTGCTCAGCAGAGGCTTAAACTCTATAACAAGGTTCCTCCAAATGGTCTTGTTCTGTATACTGGCACAATTGTGACTGATGATGGGAAGGAAAAGAAGGTGACTATTGATTTTGAGCCTTTCAGACCTATTAATGCATCCCTTTATCTTTGTGACAATAAGTTTCACACTGAAGCTTTGAATGAGCTCCTTGAGTCTGATGACAAGTTTGGATTTATTGTCATGGATGGCAACGGTACTTTGTTTGGGACATTGAGTGGTAATACAAGAGAGGTGCTTCATAAATTCAGTGTGGATCTCCCAAAGAAACATGGAAGAGGAGGGCAATCTGCTCTGCGTTTTGCCCGTCTTCGCATGGAGAAGCGTCATAACTATGTGCGGAAGACGGCCGAGCTTGCTACCCAGTTCTATATCAATCCTGCTACCAGCCAACCCAATGTTTCTGGATTAATACTGGCTGGTTCAGCTGATTTCAAGACTGAACTTAGTCAGTCAGATATGTTTGATCCTCGACTTCAGGCAAAAATACTCAATGTTGTTGATGTCTCCTACGGAGGCGAGAATGGGTTTAATCAGGCTATTGAACTCTCTGCTGAAATTCTGTCCAATGTGAAGTTTATCCAGGAGAAGCGATTGATTGGAAAATACTTTGAGGAAATCAGCCAGGATACTGGGAAGTATGTTTTTGGGGTTGATGATACTCTAAAGGCTTTAGAGATGGGAGCTGTTGAGACACTTATTGTGTGGGAAAATCTGGATATGAATAGGTATGTCTTGAAAAATAGTGCTACTGGTGAGGTTGTCATTAAGCACTTAAACAAGGAACAGGATGCCGATCAAAGCAATTTTCGGGATCCTGAGAGCAATGCTGATTTTGAGGTTCAGGAGAAGTTGTCTCTGCTGGAGTGGTTTGCAAATGAATACAAACGCTTCGGTTGCACTCTTGAGTTTGTCACCAATAAATCACAAGAAGGCTCACAATTTTGCAGAGGTTTTGGTGGGATAGGTGGGATCTTGCGGAAAGGGGAGCCAAAATACCTGCACCAGTATGGGAGTTGGTTGCACCTGCTCCTCCTCCTCCTCCTTGTGTGTCCATGGTGTTGCATAGAATGTTTCATTGTGAATCAAGATACTCTGCCCCCAAGGTGCTCCTTTCTGATACGAGTTACTTTCTTACTTGTATTCCTATCATTCAGACTCTGGCACCACAAATTCCTGCAAAGCTTCTGGCAACACCTGCTCTCCTCTCTACTACTAACACCCAGAAAAGCAAGAACAAAAACATGTACCTCAGAGAAACACTACCCAGAAGCAGTGATGGTTAATCCAGATGGTTTTCAAGGGTGCTCCAGCATATACCTGGCACTAGTGTCCGAGCCTATGACTAAATCTTTCATGTGTTAG 1704 0.4366 MATHAGTLLSLAPPHKRLLAYYCLKMVDGHETDKNIEVWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVETLIVWENLDMNRYVLKNSATGEVVIKHLNKEQDADQSNFRDPESNADFEVQEKLSLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRKGEPKYLHQYGSWLHLLLLLLLVCPWCCIECFIVNQDTLPPRCSFLIRVTFLLVFLSFRLWHHKFLQSFWQHLLSSLLLTPRKARTKTCTSEKHYPEAVMVNPDGFQGCSSIYLALVSEPMTKSFMC 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01563 567 Gene3D eRF1 domain 2 161 302 IPR042226 -
Gma09g01563 567 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 26 440 IPR004403 GO:0003747|GO:0006415
Gma09g01563 567 PANTHER EUKARYOTIC PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1-3-LIKE 26 440 - -
Gma09g01563 567 Gene3D eRF1 domain 1 22 160 IPR024049 -
Gma09g01563 567 Pfam eRF1 domain 1 43 163 IPR005140 -
Gma09g01563 567 Pfam eRF1 domain 2 169 302 IPR005141 -
Gma09g01563 567 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 31 165 IPR024049 -
Gma09g01563 567 Gene3D - 304 443 IPR029064 -
Gma09g01563 567 Pfam eRF1 domain 3 306 440 IPR005142 -
Gma09g01563 567 TIGRFAM aRF1/eRF1: peptide chain release factor 1, archaeal and eukaryotic forms 38 440 IPR004403 GO:0003747|GO:0006415
Gma09g01563 567 SUPERFAMILY L30e-like 303 440 IPR029064 -
Gma09g01563 567 SUPERFAMILY Translational machinery components 167 301 - -
Gma09g01563 567 SMART eRF1_1_2 29 165 IPR005140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01563 Gma-Chr9 40741258 40745420 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01563 26 440 Eukaryotic Initiation Factors Gene Family AT3G26618 91.084 0.0 789
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01563 K03265 - gmx:100785916 791.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01740 16 38516745 38522983 Gma09g01563 09 40741258 40745420 GST