Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma09g01560 | ATGAGCGGAAAAGCCTCCGTCTCTAAGGAGCTCCATGCCAAGCACACCAAGATATTAGAGGGACTTGTTAAGCTACCTGACAACAGGGAATGTGCAGACTGCAGGACCAAGGCACCACGATGGGCAAGTGTGAACTTAGGGATATTCATTTGCATGCAATGTTCAGGAATTCACCGGAGTCTTGGAGTGCATATATCAAAGGTGCGGTCCACAACTTTGGATACATGGTTGCCAGATCAAATTTCTTTTATGCAATTAATGGGTAATGCGAAGTCAAATAAGCACTGGGAGGCAGAATTACCGCCAAATTTTGACAGAAATGGATATGGAGTCGAGAAGTTTATTCGTTCCAAGTATGTGGAGAAAAGATGGGCTTCAAAAGGTGGACTACAACCAGCTTCAAAGTCAGCTGAAATAATCTTTAACTCGAATAAGTCACCAGCTTCTGGGGCCAAGAGTGCTATTCAGAATAGGAGATTGTCTCTTGAGGAAAGCATTCTTGTGAAACACATGGCACAAATTCGGTCTCCAATAACGAGATCTCATGAGGGCTCCTCAGATTTGCAAAAGAAGAATTCACCACCACCAATAAGGAGGCCATCTGCATCATTTGATTTTGACTACTCTAGGGGAAAGAACAATGCTGGACAACATTTGATTGAAAAGGCTTATGAGGTGTATGTTTGTAGATTGTTGAGCTAG | 702 | 0.4302 | MSGKASVSKELHAKHTKILEGLVKLPDNRECADCRTKAPRWASVNLGIFICMQCSGIHRSLGVHISKVRSTTLDTWLPDQISFMQLMGNAKSNKHWEAELPPNFDRNGYGVEKFIRSKYVEKRWASKGGLQPASKSAEIIFNSNKSPASGAKSAIQNRRLSLEESILVKHMAQIRSPITRSHEGSSDLQKKNSPPPIRRPSASFDFDYSRGKNNAGQHLIEKAYEVYVCRLLS | 233 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma09g01560 | 233 | Gene3D | Arf GTPase activating protein | 2 | 129 | IPR038508 | - | |
Gma09g01560 | 233 | Pfam | Putative GTPase activating protein for Arf | 17 | 127 | IPR001164 | GO:0005096 | |
Gma09g01560 | 233 | PANTHER | ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD15-RELATED | 1 | 218 | - | - | |
Gma09g01560 | 233 | MobiDBLite | consensus disorder prediction | 178 | 208 | - | - | |
Gma09g01560 | 233 | MobiDBLite | consensus disorder prediction | 178 | 192 | - | - | |
Gma09g01560 | 233 | CDD | ArfGap | 19 | 119 | - | - | |
Gma09g01560 | 233 | SMART | arf_gap_3 | 5 | 132 | IPR001164 | GO:0005096 | |
Gma09g01560 | 233 | ProSiteProfiles | ARF GTPase-activating proteins domain profile. | 16 | 137 | IPR001164 | GO:0005096 | |
Gma09g01560 | 233 | PANTHER | ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 | 1 | 218 | IPR044520 | GO:0005096 | |
Gma09g01560 | 233 | SUPERFAMILY | ArfGap/RecO-like zinc finger | 15 | 126 | IPR037278 | - | |
Gma09g01560 | 233 | PRINTS | HIV Rev interacting protein signature | 47 | 64 | IPR001164 | GO:0005096 | |
Gma09g01560 | 233 | PRINTS | HIV Rev interacting protein signature | 68 | 89 | IPR001164 | GO:0005096 | |
Gma09g01560 | 233 | PRINTS | HIV Rev interacting protein signature | 28 | 47 | IPR001164 | GO:0005096 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma09g01560 | Gma-Chr9 | 40704473 | 40707574 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma09g01560 | 19 | 119 | C2H2 Transcription Factor Family | AT4G05330 | 47.664 | 7.71e-29 | 109 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma09g01560 | K12486 | - | gmx:100802691 | 436.417 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma09g01560 | 09 | 40704473 | 40707574 | Gma09g01560 | 09 | 40704473 | 40707574 | ECH | |
Gma16g01737 | 16 | 38482705 | 38487237 | Gma09g01560 | 09 | 40704473 | 40707574 | GST | |
Gma08g00551 | 08 | 4520116 | 4526808 | Gma09g01560 | 09 | 40704473 | 40707574 | PCT | |
Gma09g01560 | 09 | 40704473 | 40707574 | Gma08g00551 | 08 | 4520116 | 4526808 | PCT |