Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01557 ATGTCTTCTGCCGGCGGCGACAGCGGCGGCAGCGCTACTTCCGGCGAGCCTCGCCAATACTTCTGCCACCAGTGCAACCGCACCGTCTCAATTTCCCCTTCTCCCTCCTCCGATCTCCTCTGCCCCACTTGCAACGGCGGCTTCCTCGAAGAACTCGAAATCCCAATCCCCGACCCTAACCCTCCTAATCCTTTTTTCTCCGACTTCCCCCTCGGCGGCGCCGCCACCATTCCCCTCGTCCTCCCCGGCGCTGCCACCTCCCCTCCCTTCGGCGATCTCTCAGCCCTCTTCGGCGACCGATCCGACGCTGCCGCCTCCGATGCCTTCAACCCCCTCGTCTTCCTCCAGAACTACTTCCAAACCCTAAGAGCCGGCGGGGGCGGCAACCTCCAACTCGTGATCGAGTCCGGCGACCCCGGCGGAGTCTTCCGCTTCCCCGGCGTCACCCACGGCGACTACTTCTTCGGGCCGGGCCTCGAGGAGCTGATCCAGCACCTCGCCGAGAACGATCCTAACCGCTACGGCACCCCGCCGGCCTCCAAGTCCGCCGTCGAGGGCCTGCCGGACGTCTCCGTCACCGAGGAGCTGCTGGCGTCGGATTCCTCGCAGTGCGCCGTTTGCAAAGACACCTTCGAGCTCGGCGAGACCGCGAAGCAGATCCCCTTTTGTCGGTATGAATTGCCCACAGATGATCCTGATTACGAGCAGAGGGCTCGTCGTGGTGGCGGTGGCGGTAGTGGTGGTGATGGTGCCGGAAGTGGGGCAGCTCCACAAGTGAATTGGAACATGGCATTGGGGCCCGCTGGTGGTTCTGCGGATTCATCCGGTGGCGGTGGCAGTGGCGGTGATAGTTCGCAGAGGAGAAGATTTAGGGTGTCTTTGCCGTGGCCGTTTAGGCAATTTGCCGAGACAAACAGGAAGATCTCGATTGAGAACCACTCGTGTTTTATATGTATGAAGAGTTTTTTCAAAATTGCAGCATTTTGTTGA 990 0.6101 MSSAGGDSGGSATSGEPRQYFCHQCNRTVSISPSPSSDLLCPTCNGGFLEELEIPIPDPNPPNPFFSDFPLGGAATIPLVLPGAATSPPFGDLSALFGDRSDAAASDAFNPLVFLQNYFQTLRAGGGGNLQLVIESGDPGGVFRFPGVTHGDYFFGPGLEELIQHLAENDPNRYGTPPASKSAVEGLPDVSVTEELLASDSSQCAVCKDTFELGETAKQIPFCRYELPTDDPDYEQRARRGGGGGSGGDGAGSGAAPQVNWNMALGPAGGSADSSGGGGSGGDSSQRRRFRVSLPWPFRQFAETNRKISIENHSCFICMKSFFKIAAFC 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01557 329 MobiDBLite consensus disorder prediction 231 287 - -
Gma09g01557 329 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 11 221 - -
Gma09g01557 329 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 221 305 - -
Gma09g01557 329 Pfam zinc-ribbon 19 52 IPR039525 GO:0061630
Gma09g01557 329 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RING1 11 221 - -
Gma09g01557 329 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RING1 221 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01557 Gma-Chr9 40672861 40679448 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01557 151 239 C3H Transcription Factor Family AT5G01980 40.000 2.04e-16 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01557 - K11982 gmx:100784504 532.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g01557 09 40672861 40679448 Gma09g01557 09 40672861 40679448 ECH
Gma16g01735 16 38332917 38337001 Gma09g01557 09 40672861 40679448 GST