Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01540 ATGTCTTCCCCTCAAGTCATTACCTGCAAAGCTGCAGTGGCATGGAGAGCTGGGGAAGCATTGGTGATGGAGGAAGTAGAAGTGAGTCCTCCCCAACCAATGGAGATTAGGATTAAGGTTGTCTCCACCTCTCTCTGTCGCAGTGATCTCTCCGCTTGGGAATCTCATgccatatttcctcgcatatttggccacgaagcatcaggGATTGTTGAGAGTGTGGGACAGGGAGTGACTGAATTCAAAGAGGGGGACCATGTGCTAACAGTATTCATTGGAGAATGCATGTCATGCAGGCAGTGCACATCTGGAAAAAGTAACACTTGCCAAATTTTGGGATTGGAAAGGAGGGGTTTAATGCATAGTGATCAGAAGACACGCTTCTCATTAAAAGGGAAGCCTGTTTACCATTATTGTGCAGTTTCAAGTTTCAGTGAATATACAGTAGTCCATTCTGGATGTGCTGTGAAAGTCAGCCCCCTTGCACCTCTTGAGAAAATATGTCTTCTGagctgtggggttgctgcagGTCTTGGTGCAGCATGGAATGTTGCTGATGTGTCAAAAGGATCAACTGTGGTGATTTTTGGTCTTGGAACTGTTGGCCTATCTGTTGCTCAAGCTTCCAAACTAAGAGGTGCATCTCGAATAATTGGTGTGGACAACAATCCACAGAAGTGTGAAAATGCCAAAGCTTTTGGGGTTACTGAAGTTGTTGATCCGAATTCCTACAAAGAACCTATAGCTCAGGTTATTAAGCGCATTACTGATGGTGGGGCAGATTTCTCGTTTGAATGTGTAGGTGACACTGATACGATAACCACTGCATTGCAGTCATGCTGTGATGGATGGGGTTTGACTGTAACACTTGGTGTGCCAAAGGTGAAGCCTGAGATGTCTGCTCATTATGGGCTACTCCTAATGGGAAGAACATTGAAAGGATCTCTATTTGGAGGATGGAAACCTAAATCTGATCTTCCTTCATTAGTAGAGAAGTATCTCAACAAGGAAATCCAGATTGATGACTACATAACACACAATTTGTCATTTGATGACATTAACAAAGCTTTCAATCTCATGAAGGAAGGGGAGTGTCTGCGTTGTGTTATCCACATGCCAAGATAA 1125 0.4142 MSSPQVITCKAAVAWRAGEALVMEEVEVSPPQPMEIRIKVVSTSLCRSDLSAWESHAIFPRIFGHEASGIVESVGQGVTEFKEGDHVLTVFIGECMSCRQCTSGKSNTCQILGLERRGLMHSDQKTRFSLKGKPVYHYCAVSSFSEYTVVHSGCAVKVSPLAPLEKICLLSCGVAAGLGAAWNVADVSKGSTVVIFGLGTVGLSVAQASKLRGASRIIGVDNNPQKCENAKAFGVTEVVDPNSYKEPIAQVIKRITDGGADFSFECVGDTDTITTALQSCCDGWGLTVTLGVPKVKPEMSAHYGLLLMGRTLKGSLFGGWKPKSDLPSLVEKYLNKEIQIDDYITHNLSFDDINKAFNLMKEGECLRCVIHMPR 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01540 374 Gene3D - 177 315 - -
Gma09g01540 374 PANTHER ALCOHOL DEHYDROGENASE 4 372 - -
Gma09g01540 374 SUPERFAMILY GroES-like 4 182 IPR011032 -
Gma09g01540 374 PANTHER ALCOHOL DEHYDROGENASE-LIKE 6 4 372 - -
Gma09g01540 374 Pfam Zinc-binding dehydrogenase 201 324 IPR013149 -
Gma09g01540 374 SUPERFAMILY GroES-like 323 371 IPR011032 -
Gma09g01540 374 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 64 78 IPR002328 GO:0008270|GO:0016491
Gma09g01540 374 CDD alcohol_DH_plants 7 371 - -
Gma09g01540 374 Pfam Alcohol dehydrogenase GroES-like domain 34 157 IPR013154 -
Gma09g01540 374 Gene3D - 12 367 - -
Gma09g01540 374 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 163 336 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01540 Gma-Chr9 40323781 40328486 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01540 35 109 Monolignol Biosynthesis Gene Families AT2G21730 40.506 5.89e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01540 K00001 - gmx:100819938 760.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g01540 09 40323781 40328486 Gma09g01540 09 40323781 40328486 ECH