Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01533 ATGATCTTGACATTAATTAAGGTAAGTTTTTTGTGTGTTATCTTGTTTGTGTCATTCAAATTCAACATGGTCTTGTGCATTGAACTTGAGGAATACTATCCAGAAGAAAGAGATGCTTTGATGCTCATAAGGGATTCTTTGAATTCTTCTGTCAATTTGCATGGGAATTGGACAGGCCCTCCTTGTATAGACAATCATAGTAGATGGATTGGTATCACTTGTTCAAATTGGCATGTTGTTCAAATTGTTCTTGAAGGAGTTGACCTTAGTGGTTATTTACCTCACACATTCCTTCTAAACATAACTTTCTTGAGCCAACTTGACTTCAGAAACAATGCACTTTCTGGACCACTGCCAAGCCTCAAGAATTTGATGTTTTTGGAACAAGTCCTATTATCATTCAATAACTTCTCAGGGTCAATTCCTGTGGAGTATGTTGAAATTCCTAGTCTACAAATGTTGGAGCTGCAAGAGAATTACTTAGATGGTCAAATTCCACCCTTTGATCAACcatcattggcaagtttcaatgtgtcatataatcatctgtcagggcctattccTGAAACTTATGTGCTGCAAAGGTTCCCGGAGAGTGCATATGGTAATAACTCAGATCTTTGTGGAGAGCCATTGCATAAGTTATGTCCTATTGAACCTCCTGCCCCATCTCCTTCTGTTTTTCCTCCAATCCCAGCACTGAAGCCAAATAAGAAGAGGTTTGAAGCATGGATTGTCGCTTTGATTGGTGGTGCAGCTGCACTGTTTCTTCTTTCTCTGATCATTATTATTGCTTTCATGCTTTGTAAAAGGCGAACAAATGGAAAAGAATCAACAAGAAATGATTCAGCAGGGTATGTTTTTGGGGCATGGGCAAAGAAGATGGTGTCTTATGCTGGGAATGGTGATGCTTCTGAAAGATTAGGCAGATTGGAATTTTCCAACAAGAAATTGCCAGTTTTTGACTTGGATGATTTATTGAGGGCATCAGCAGAAGTGCTAGGAAGAGGGAACTTAGGCATTACATACAAAGCAACACTTGAAACAGGAACTGTTGTTGCAGTGAAGAGAATTAACCACATGAATGAAGTGAGCAAGAAGGAATTTATCCAGCAGATGCAATCGCTTGGCCAGATGAAGCATGAAAATCTAGTAGAAATAATCTCCTTTTATTTTTCAGAGGAGCAAAAGTTGATAATTTATGAATTTACCTCTGATGGCACTTTGTTTGAACTCTTACATGAGGGTAGAGGAATTGGAAGAATGCCACTTGATTGGACCACAAGACTTTCAATGATCAAAGACATAGCAAAGGGTCTAGTTTTCCTTCATCACTCTTTGCCTCAACACAGGGTTCCTCATGCCAACCTCAAATCATCCAATGTCCTAATCCATCAAGATAGTAAAGGTTACCATTGCAAGCTCACAGACTGTGGTTTCTTGCCTCTTCTCCAAGCCAAACAGAATGCAGAAAAACTAGCCATAAGGAGGTCACCGGAATTTGTTGAAGGGAAGAAACTGACACACAAAGCTGATGTCTATTGCTTTGGCATCATTATGCTAGAGATTATAACTGGCAGAATACCTGGTCATATCTTAGGTGAAATTGAGGAAACAACCAATGATCTTTCTGATTGGGTAAGAACTGTAGTGAACAATGATTGGTCCACAGATATATTGGATTTAGAAATACTAGCAGAGAAAGAAGGGCATGATGCAATGCTGAAGCTGACAGAGTTAGCTCTAGAGTGTACAGATATGACTCCAGAGAAACGGCCTAAAATGAATGTAGTATTGGTGAGAATAGAAGAGATAGAGCAAATGAGAAAAGAGAATGACTAA 1842 0.38 MILTLIKVSFLCVILFVSFKFNMVLCIELEEYYPEERDALMLIRDSLNSSVNLHGNWTGPPCIDNHSRWIGITCSNWHVVQIVLEGVDLSGYLPHTFLLNITFLSQLDFRNNALSGPLPSLKNLMFLEQVLLSFNNFSGSIPVEYVEIPSLQMLELQENYLDGQIPPFDQPSLASFNVSYNHLSGPIPETYVLQRFPESAYGNNSDLCGEPLHKLCPIEPPAPSPSVFPPIPALKPNKKRFEAWIVALIGGAAALFLLSLIIIIAFMLCKRRTNGKESTRNDSAGYVFGAWAKKMVSYAGNGDASERLGRLEFSNKKLPVFDLDDLLRASAEVLGRGNLGITYKATLETGTVVAVKRINHMNEVSKKEFIQQMQSLGQMKHENLVEIISFYFSEEQKLIIYEFTSDGTLFELLHEGRGIGRMPLDWTTRLSMIKDIAKGLVFLHHSLPQHRVPHANLKSSNVLIHQDSKGYHCKLTDCGFLPLLQAKQNAEKLAIRRSPEFVEGKKLTHKADVYCFGIIMLEIITGRIPGHILGEIEETTNDLSDWVRTVVNNDWSTDILDLEILAEKEGHDAMLKLTELALECTDMTPEKRPKMNVVLVRIEEIEQMRKEND 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01533 613 Gene3D Transferase(Phosphotransferase) domain 1 405 613 - -
Gma09g01533 613 SUPERFAMILY L domain-like 33 192 - -
Gma09g01533 613 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 11 607 - -
Gma09g01533 613 Gene3D Ribonuclease Inhibitor 33 218 IPR032675 -
Gma09g01533 613 SUPERFAMILY Protein kinase-like (PK-like) 332 602 IPR011009 -
Gma09g01533 613 Gene3D Phosphorylase Kinase; domain 1 297 403 - -
Gma09g01533 613 Pfam Protein tyrosine and serine/threonine kinase 332 598 IPR001245 GO:0004672|GO:0006468
Gma09g01533 613 ProSiteProfiles Protein kinase domain profile. 328 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01533 613 PANTHER POLLEN RECEPTOR-LIKE KINASE 4 11 607 - -
Gma09g01533 613 Pfam Leucine rich repeat N-terminal domain 35 75 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01533 Gma-Chr9 40214632 40216779 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01533 36 605 Receptor kinase-like Gene Family AT1G48480 34.127 1.57e-103 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gma09g01533 PK_Tyr_Ser-Thr 1e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01533 - - gmx:100788386 1189.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01715 16 38100219 38106351 Gma09g01533 09 40214632 40216779 GST