Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01516 ATGAAGAAGGCACTACCTACGAATGGTAAAATCGCCAAGGACGCCAAAGAGACTGTTCAGGAATGCTTATCCGAGTTTTTAAGGTTTGGAATAAACACAAACAAGGAAAAACTGCCACATGTATTGAGATGGATGGATTACATTCAGCACAAGCAAGAATTTGTAGGTTTATTTGAGAAAATATTGTTGCAGAAGCCTGGATTTGAGCCCCCGGTAACACATGCTGTTGGAGTTGTGGAAGCTGATTTAAAATCAAACAACACTGAGCAAAGCGTAAAGAATGTCAGCAAGTCCGAAGTAGACTCAAGCAAGGATAAAAACAAAGTTGAGTTCCTCCCACCCAAGCCTCCCCCTTTTCCTCCTCCTCTGCCACCCTCCGTCCTCCTCCCCCTCACACGTCGCCGCGGCGGCTTCATCCCCTCCTGCCTCTCCGACGACGCCGTCTCCATGCGTAACTTCGACCATGGCTTCATCGTGATCGCCGCCATCCTCCGCCGCATCGAGCCCCTCGACAACTCCGCCATCTCAAAAGGCATGTCGCCCGCTGCTAGAGACTCCATGAAGTAG 567 0.4991 MKKALPTNGKIAKDAKETVQECLSEFLRFGINTNKEKLPHVLRWMDYIQHKQEFVGLFEKILLQKPGFEPPVTHAVGVVEADLKSNNTEQSVKNVSKSEVDSSKDKNKVEFLPPKPPPFPPPLPPSVLLPLTRRRGGFIPSCLSDDAVSMRNFDHGFIVIAAILRRIEPLDNSAISKGMSPAARDSMK 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01516 188 Gene3D Histone, subunit A 1 38 IPR009072 GO:0046982
Gma09g01516 188 PANTHER TRNA-AMINOACYLATION COFACTOR ARC1 FAMILY MEMBER 5 108 - -
Gma09g01516 188 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 1 29 IPR003958 -
Gma09g01516 188 PANTHER AMINOACYL TRNA SYNTHASE COMPLEX-INTERACTING MULTIFUNCTIONAL PROTEIN 1 5 108 - -
Gma09g01516 188 MobiDBLite consensus disorder prediction 89 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01516 Gma-Chr9 39914119 39918024 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01516 1 29 CCAAT-HAP3 Transcription Factor Family AT4G14540 79.310 1.65e-09 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01516 K15437 - gmx:102661431 176.407