Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01485 ATGGAGTGCAATAAGGATGAGGCTACCCGAGCTAAAGAAATTGCTGAGAGGAAGTTTGCTGCAAAGGATACATTGGGTGCAAAGAAATTTGCTTTGAAGGCCTTAAATTTATTTCCGGATCTTGAGGGTATTTCTCAAATGGTAGCAACACTTGATGTGTATATTGCTGCCGAGAATAAAACAAATGGAGAAGCAGATTGGTATGGTGTGCTTGGTGTGGACCCCCTTGCTGACGAAGATACTGTCAGGAGACAATACAGGAAGCTAGCTCTCCAGCTTCACCCTGATAAGAACAAGTCCATTGGAGCTGATGGGGCCTTTAAACTCATTTCAGAGGCATGGAGTTTACTATCAGATAAGGCTAAAAGGGCATCGTATGATAAGAGAAGTGGAAGAGACCGGAAAGTTTCTACTAAGTTTGGAGGTCCATCATCACAAAAAGGGACTAATGGTAGTTTCAATTTCACTAAGACCGCCCCTTCATGTGCAACTACTCGGAAGAATACTGCAAAAGAGCATGCTTCATCTTCTACTCATAAGTCAAAATCAAATACATTTTGGACTGTTTGCCGTCGATGCAAAATGCAGTATGAGTATCTTAGAGTTTATCTTAACCTTAAACTCTTATGTCCCAACTGCCATGAGGCATTTGTGGCTGTAGAAACTGCTCCTCCACCTGCAAGTGGTATTAGACCTGCAACTCAATGGAGTTTTTCACAGAAGCAAAATTCCAGCCGCCAACCTAATAAAAGCAAATCTAATGCTGGAAAGAATAACATGGCAGCCCCAAATGTTGGAGGAGGGTCTTGTAGTAAGACTGACTCCTATGAAAAGGCCAATTTCCAGTGGGCTCCATTCTCAAAAATATCTGGTGTTTCTAATGTTGCTCAAGCTGCAAGTGTGGTTCAGCAGGCATATGATAAGGTGAAGCGAGATCGTGAAGAGGCACAAGCAGCTAGGAAAAGGGAAGAGGCCTTAAAAAGGAAGCAGCATGCTTCTAAAAAGGGTTACTATAATCCTTCTAAGAGAAGAAGGGGGGGCATGGAGGATGCTAGTGCGAGTAACCATGGTAAGGAAACAAACTCATTCAGATCTAAACAGGGCAATTTTGAATATAATAGGGTTAATGGAATCAGCAAGACCGGCCATGTGGGAGATATCTCCCCAGTTCAACTGAAGAATCTTCTTATGGAAAAAGCTAGAAAAGAAATTAGCAATAAACTCAGGCAAGTTCAGTCAAATGCTGTTGATAAAACTGCGATGAAAGAGAATGGAAATGACTTCCAAGAAGTGAGTGAGAAAGGAGAAAAATGTTCCAGAAACTCTGAGATGTGTGCTCAGGATAACATTGAGAAGTCAGAAGATAGAAAAAGCGGATCCCGAGCCATCAAGCCATTTGCAGGTTCTACAATTGCTAAAGTTAGCCGAAAATTTTTGGAAACAACACCTGTAGATGTACTATATCCTGATTTCCATGATTTTTGCAAAGATCGAACTGAAGGATCTTTTGGTGAAAATCAAGTATGGGCCGTGTATGATAACGATGATGGGATGCCTCGATGTTATGTGCTGATTCGCCGCATCATCTCCCTGAATCCGTTCAAGATGCAGATCAGTTGGCTCAACCCAAATACCAACAGTGAACTGGGCCCCCTAAAATGGGTTGCTTCAGGCTTTTCAAAAATTTGTGGGGATTTCAGAACAAGCAGACCTGAAATTTGTGGTTCTACCAATTTTTTCTCCCATAAGGTTAGGTGGAGAACTGGTGCTGAGGGAGCCATTTGTATATATCCGAGGAAAGGTGATGTTTGGGCCATATACAGGAACTGGTCTCCTGACTGGAATGAGCTAACAGCAGATGAGGTTATACACAAGTTTGATGTGGTTGAAGTACTTGAGGATTTTATTGAAGGGCATGGTATAGATGTTATTCCTCTGGTCAAAGTGGCTGGATTCAGGACAGTGTTTCACCACCACTTAGATCCAAAAGAAATCAGGATCATTCCGAGGGAAGAGATGTTTCGATTCTCTCATCAAATACCTTCATATGTACTCACTGGTCAAGAAGCTCCAGAGGCTCCAAAGGGTTGCAGGGTGCTGGACCCAGCTGCTACTCCATTTGAACTTCTTCAGCAACTCCAAGCTTACCTCACTACTCTGGCCCACGCCCACGCCCATTTCTACGCCTTCAAGCTCATTCGCTTCTGCGCCATCAGTCTCTCAAACATCACTACGCACGCCTCATCTTCGACCACTTTCCTTCTCTCAACACTCACCTCTTCACCGCCTACGCCGCCCACCCCTCCACTCTCTCCCTCTTCTGCCACATGCTCCACTCCCAATCCCCCCCGCCCCAACCACTTCATCTTCCCCCAAGCGCTTAAAACCTGTCTCGCGTCACGCACCGCTGAATTCCTGCATGCCCAGATCGTTAAATCCGAGTTTCATTATTTCCCACTTGTGCAAGCGGCTCTTGTTGACTCTTACTCCAAGGTTTCGGACGGGTTAGGGAATGCAAAGAAGGTGTTTGATGAAATGTCTGAGAGAAATGTGGTGTCTTTTACCGCGATAGTTTCTAGGTTTAAGAGGGTTGGGGGTGCTATGAGGGTGTTTGGTGAAATGCTAGAGAGGGATGTGCCATCGTGGAATACTCTCGTTGCTGGGTGCACTCAGAATGGGGCTTTCACTAGGATTAAGTTGTTTAGGAGAATGGTTTGTGAGTGTAATAGGCCGAATGGGGTTACTGTGGCTTGTGCACTTTCGGCTTGTGGTCACACGGGGATGCTTCAGCTTGGGAGATGGATACATGGTTATATGTACAAAAATGGGTTTGCATTTGACTCGTTTGTCTCGAATGCGCTTGTGGATATTTTTGTGTTGCACGGGCAGAGTGATAGTGCAATTGCCATTTTTGAGCAAATGGTGGAGGGTGGCGATGGCATGGGACCAGATGAGGTCACCTTCATTGGGACGTTGGATGAAGCTATCAATGCTGTCAAGGGTATGAGCATGGAACCAATTGAGGTTGTCTGGGCCTCATTTCTTAACAGATGTAAGGTTCCTGGCCGAACAAATTTGGCAGAATTTGCTGCCAAAAAACTGATTGAAATAGATCCACATAATAGAGGTTATAGGATTATGTTGGCTGATGTGTATGGGGAGTTAGGGAAGTGGGATGAAGTGAGGAATGTGTGGAGGACATTGAAGCAACAAAAGTCTTATAAAGTTCCAGGGTGCAGCTGCATTGTTGATGACCAGGTTCATCAGTTCTATTCTCTTGATAAATCAAATCTGAAGACAAAAAGACTTGTACATTGTCTTAGAAAGTCTAGTTGGTTTTAG 3342 0.4425 MECNKDEATRAKEIAERKFAAKDTLGAKKFALKALNLFPDLEGISQMVATLDVYIAAENKTNGEADWYGVLGVDPLADEDTVRRQYRKLALQLHPDKNKSIGADGAFKLISEAWSLLSDKAKRASYDKRSGRDRKVSTKFGGPSSQKGTNGSFNFTKTAPSCATTRKNTAKEHASSSTHKSKSNTFWTVCRRCKMQYEYLRVYLNLKLLCPNCHEAFVAVETAPPPASGIRPATQWSFSQKQNSSRQPNKSKSNAGKNNMAAPNVGGGSCSKTDSYEKANFQWAPFSKISGVSNVAQAASVVQQAYDKVKRDREEAQAARKREEALKRKQHASKKGYYNPSKRRRGGMEDASASNHGKETNSFRSKQGNFEYNRVNGISKTGHVGDISPVQLKNLLMEKARKEISNKLRQVQSNAVDKTAMKENGNDFQEVSEKGEKCSRNSEMCAQDNIEKSEDRKSGSRAIKPFAGSTIAKVSRKFLETTPVDVLYPDFHDFCKDRTEGSFGENQVWAVYDNDDGMPRCYVLIRRIISLNPFKMQISWLNPNTNSELGPLKWVASGFSKICGDFRTSRPEICGSTNFFSHKVRWRTGAEGAICIYPRKGDVWAIYRNWSPDWNELTADEVIHKFDVVEVLEDFIEGHGIDVIPLVKVAGFRTVFHHHLDPKEIRIIPREEMFRFSHQIPSYVLTGQEAPEAPKGCRVLDPAATPFELLQQLQAYLTTLAHAHAHFYAFKLIRFCAISLSNITTHASSSTTFLLSTLTSSPPTPPTPPLSPSSATCSTPNPPRPNHFIFPQALKTCLASRTAEFLHAQIVKSEFHYFPLVQAALVDSYSKVSDGLGNAKKVFDEMSERNVVSFTAIVSRFKRVGGAMRVFGEMLERDVPSWNTLVAGCTQNGAFTRIKLFRRMVCECNRPNGVTVACALSACGHTGMLQLGRWIHGYMYKNGFAFDSFVSNALVDIFVLHGQSDSAIAIFEQMVEGGDGMGPDEVTFIGTLDEAINAVKGMSMEPIEVVWASFLNRCKVPGRTNLAEFAAKKLIEIDPHNRGYRIMLADVYGELGKWDEVRNVWRTLKQQKSYKVPGCSCIVDDQVHQFYSLDKSNLKTKRLVHCLRKSSWF 1113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01485 1113 SUPERFAMILY Chaperone J-domain 62 126 IPR036869 -
Gma09g01485 1113 MobiDBLite consensus disorder prediction 139 159 - -
Gma09g01485 1113 MobiDBLite consensus disorder prediction 354 368 - -
Gma09g01485 1113 Coils Coil 302 329 - -
Gma09g01485 1113 Pfam DnaJ domain 66 127 IPR001623 -
Gma09g01485 1113 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Gma09g01485 1113 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Gma09g01485 1113 Pfam PPR repeat 952 978 IPR002885 -
Gma09g01485 1113 SMART dnaj_3 65 122 IPR001623 -
Gma09g01485 1113 Gene3D DnaJ domain 63 183 IPR036869 -
Gma09g01485 1113 Pfam Domain of unknown function (DUF3444) 484 689 IPR024593 -
Gma09g01485 1113 MobiDBLite consensus disorder prediction 226 271 - -
Gma09g01485 1113 Gene3D Tetratricopeptide repeat domain 898 1089 IPR011990 GO:0005515
Gma09g01485 1113 Gene3D Tetratricopeptide repeat domain 780 897 IPR011990 GO:0005515
Gma09g01485 1113 MobiDBLite consensus disorder prediction 312 331 - -
Gma09g01485 1113 MobiDBLite consensus disorder prediction 232 271 - -
Gma09g01485 1113 PANTHER BNAC03G44070D PROTEIN 1 711 - -
Gma09g01485 1113 CDD DnaJ 66 119 IPR001623 -
Gma09g01485 1113 MobiDBLite consensus disorder prediction 312 368 - -
Gma09g01485 1113 MobiDBLite consensus disorder prediction 757 782 - -
Gma09g01485 1113 PANTHER BNAA04G14940D PROTEIN 1 711 - -
Gma09g01485 1113 Pfam E motif 1025 1082 IPR046848 -
Gma09g01485 1113 MobiDBLite consensus disorder prediction 761 782 - -
Gma09g01485 1113 PRINTS DnaJ domain signature 68 86 IPR001623 -
Gma09g01485 1113 PRINTS DnaJ domain signature 122 141 IPR001623 -
Gma09g01485 1113 PRINTS DnaJ domain signature 102 122 IPR001623 -
Gma09g01485 1113 PRINTS DnaJ domain signature 86 101 IPR001623 -
Gma09g01485 1113 MobiDBLite consensus disorder prediction 127 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01485 Gma-Chr9 39581060 39593026 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01485 4 229 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.906 2.03e-30 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01485 - - gmx:100816712 1422.91