Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01478 ATGGCTTGTTCAGTGCATCTCCTTCTTCTTCTTACTTCACTTCTGGCTTTGTTCTTTAACCCAACATGTGTCTATGGCAATGATGAGCTTAGAACACTTTTGGACTTGAAATCTAGTTTGGATCCAGAAGGGCACTTTCTGTCCTCATGGACTATTGATGGCACCCCATGTGGTGGTTCCTTTGAGGGAGTGGCTTGCAATGAGAAGGGTCAAGTGGCAAATGTGTCTTTGCAGGGAAAAGGACTCTCTGGGAAGCTCTCACCAGCCATTGCTGGACTCAAGCACTTGACAGGACTCTACTTGCACTACAACTCTTTGTATGGAGAGATTCCAAGGGAACTTGCTAACTTGACTGAGCTTAGTGACTTGTATTTGAATGTGAATCACTTGTCTGGTGAAATCCCACCTGAGATTGGCATGATGGAGAGTCTGCAAGTTTTGCAGCTTTGTTATAATCAGTTAACAGGAAGCATCCCTACACAGCTTAGTGATTTGAAAAAGCTCAGTGTCCTTGCTCTTCAGTCAAACCAGTTTGCTGGAGCTATCCCTGCTAGTCTAGGTGATTTGGGAATGTTGATGAGGCTAGATTTGAGCTCTAATAATCTCTTTGGTTCCATTCCCACTAAACTCGCTGATCTTCCTTTGCTGCAAGTTCTGGATGTTCACAACAATACTCTCTCTGGGAATGTACCTCCTGCTCTGAAGAGACTAGAAGAAGGATTTGTGTTTGAACATAATGTGGGGTTATGTGGAGTTGGGTTTTCATCCTTGAAAGCTTGCACTGCTTCAGATCATGCCAATCTCACTCGACCGGAACCTTATGGAGCTGGGGTTGGTGGTCTTTCTAGAGATATCCCAGAAACTGCTAATGTAAAGTTGCCTTGCAATACAACTCAGTGCCGAAATCCATCAAGATCCAAACAAGCGGCATCTATTACAGTTGGCATTGTTCTGGTTACAATTGCTGTATCAGCAATTGGTATTTTTACCTTCACTATGTATCGTCGGCGGAAACAAAAGCTTGGAAGCACGTTTGATATCTCTGAAGGTCGTCTAAGTACAGATCAAGCCAAGAGTATATACAGGAAAAATGGATCTCCTTTGGTCAGCCTTGAGTACTCTAATGGATGGGACCCTTTGGCTGATGGCAAGAATGTCAATGGGGATAGGCAAGACATGTTCCAGAGTTTCCGGTTCAACTTGGAAGAAGTGGAGTCAGCTACTCAATATTTCTCGGAACTGAATTTGTTGGGGAAAAGCAACTTCAGTGCAACGTATAAAGGAGTTCTAAGAGATGGATCTGTTGTTGCTGTCAAGAGTATTAGTAAAACTAGTTGCAAATCGGATGAGGCTGAATTTTTGAAGGGATTGAACATCTTGACCTCACTGAGGAATGAGAATTTAGTGAGGCTGAGAGGATTCTGTTGTTCAAGGGGACGAGGTGAATGCTTCCTGGTTTACGATTTTGTTTCTAATGGAAATCTGTCATGCTACCTTGACGTGAAGGAAGGTGATGGAGAAGTCCTTGAATGGTCAACTAGAGTTTCTATTGTGAAAGGGATTGCTAAAGGTATAGCATATTTACATGCATACAAAGCAAAGAAACAAGCTCTTGTTCACCAAAACATCTCAGCTGAGAAAGTGCTCATTGATCAGCGATACAACCCATTGCTTTCAGATTCTGGCTTGTACAAGCTTCTCACCAATGACATCGTCTTCTCTGCACTAAAGGGTAGTGCAGCAAAGGGCTACCTAGCTCCAGAATACACCACTACTGGGCGGTTCACAGAGAAAAGTGACGTTTATGCGTTTGGGGTGCTTCTTTTCCAGATCCTCACGGGGAAGCAGAAGATCACAAGCGCAATGCGCCTTGCTGCTGAGTCCTTCAAGTTCCCAGAATTTATTGATCCGAACTTGCATGGCAAGTTCTTTGAATACGAGGCGGCCAAACTAGCGAGAATGGCCTTACTTTGCTCCCATGAGTCTCCATTTGAGAGGCCAAGCATGGAAGCCATTGTTCAAGAACTGGGAAATTGTAGTAGCTGTCTTTGA 2052 0.4386 MACSVHLLLLLTSLLALFFNPTCVYGNDELRTLLDLKSSLDPEGHFLSSWTIDGTPCGGSFEGVACNEKGQVANVSLQGKGLSGKLSPAIAGLKHLTGLYLHYNSLYGEIPRELANLTELSDLYLNVNHLSGEIPPEIGMMESLQVLQLCYNQLTGSIPTQLSDLKKLSVLALQSNQFAGAIPASLGDLGMLMRLDLSSNNLFGSIPTKLADLPLLQVLDVHNNTLSGNVPPALKRLEEGFVFEHNVGLCGVGFSSLKACTASDHANLTRPEPYGAGVGGLSRDIPETANVKLPCNTTQCRNPSRSKQAASITVGIVLVTIAVSAIGIFTFTMYRRRKQKLGSTFDISEGRLSTDQAKSIYRKNGSPLVSLEYSNGWDPLADGKNVNGDRQDMFQSFRFNLEEVESATQYFSELNLLGKSNFSATYKGVLRDGSVVAVKSISKTSCKSDEAEFLKGLNILTSLRNENLVRLRGFCCSRGRGECFLVYDFVSNGNLSCYLDVKEGDGEVLEWSTRVSIVKGIAKGIAYLHAYKAKKQALVHQNISAEKVLIDQRYNPLLSDSGLYKLLTNDIVFSALKGSAAKGYLAPEYTTTGRFTEKSDVYAFGVLLFQILTGKQKITSAMRLAAESFKFPEFIDPNLHGKFFEYEAAKLARMALLCSHESPFERPSMEAIVQELGNCSSCL 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01478 683 SUPERFAMILY L domain-like 25 236 - -
Gma09g01478 683 ProSiteProfiles Protein kinase domain profile. 411 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01478 683 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 5 681 - -
Gma09g01478 683 Pfam Protein tyrosine and serine/threonine kinase 415 676 IPR001245 GO:0004672|GO:0006468
Gma09g01478 683 Gene3D Ribonuclease Inhibitor 26 177 IPR032675 -
Gma09g01478 683 Gene3D Transferase(Phosphotransferase) domain 1 490 682 - -
Gma09g01478 683 SUPERFAMILY Protein kinase-like (PK-like) 389 676 IPR011009 -
Gma09g01478 683 Gene3D Phosphorylase Kinase; domain 1 383 489 - -
Gma09g01478 683 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 5 681 - -
Gma09g01478 683 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
Gma09g01478 683 Gene3D Ribonuclease Inhibitor 178 242 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01478 Gma-Chr9 39497316 39500795 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01478 7 524 Miscellaneous Gene Families AT4G22730 56.038 0.0 575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Gma09g01478 PK_Tyr_Ser-Thr 2e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01478 - - gmx:100806056 1338.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01674 16 37771375 37774952 Gma09g01478 09 39497316 39500795 GST
Gma09g01478 09 39497316 39500795 Gma10g01728 10 44448959 44451696 PCT
Gma10g01728 10 44448959 44451696 Gma09g01478 09 39497316 39500795 PCT