Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01470 ATGGAGGAAAGAGAGATTTTTAGTTCTGGGCATGCTGTTAAGGTTGTTGAGGCCCCCCAGAGCTTCCACGTAGCACTAAACTCCGTGCAGTTTTCCGGGCCCACAGTGGAGTCACCGGTGCCTTCTCCAGTTCCGGCATCGGCACCGGCACCGGCGCCGGTGAGTGCTTCGGTGATGAATTCAGGTAGTACGGAAGGGAAGAAGAAGAGGGGCAGGCCTAGGAAGTATGGACCGGACGGCAAGGTGGCGCTGTCGCCGATGCCGATATCGGCGTCGATTCCGTTGACCGGAGACTTCTCAGCCTGGAAAAGGGGAAGAGGGAAGCCACTTGAATCAATCAAGAAGTCTTTTAAGTTTTATGAAGCTGGAGGTGCAGGACCAGGTGATGGAATTGCATACTCAGTTGGTGCCAATTTCACACCTCACATCCTTACAGTAAATGAAGGCGAGGATGTTACTATGAAGATTATGTCCTTCTCTCAACAAGGATGTCAAGCAATTTGCATTCTGTCTGCAAATGGCACAATTTCAAATGTTACACTACGCCAACCAACTTCTTCTGGTGGTACTTTAACATATGAGGGGCGGTTTGAAATTCTCTCCTTGTCTGGTTCATATATAACAACTGAGAATGGATTAACAAAGAGCAGATCTGGTGGGATGAGCATCTCTTTGGCCGCTCCAGATGGTCGAGTAATGGGGGGTGGATTGGCTGGTTTGCTGGTAGCTGCAGGTCCTGTGCAGGTTGTTGTGGCTAGTTTTGTTCCTGGTCATCAGCTGGAGCAACAGAAACCAAAGAAGCCGAGAGTGGAGCATATATCAATGGCTGCTCCGACGTATGTCAACCCTACTTCTGCTGAAGAAATAAGAATTGGTCTTGGTGGAGTAAAGCCAATCATGACACCGGCTGCTTTTCAAGTGCACCACATTTTTGGCAATGGTCAAAGCTCTGGGAACTCAGCTTCTGATGATTCAGCTCCTTTCCCTGAAAACGAGTCCAACCCTAGCCATGCAGATGCTGGAGTTGCATGCTAA 1035 0.4928 MEEREIFSSGHAVKVVEAPQSFHVALNSVQFSGPTVESPVPSPVPASAPAPAPVSASVMNSGSTEGKKKRGRPRKYGPDGKVALSPMPISASIPLTGDFSAWKRGRGKPLESIKKSFKFYEAGGAGPGDGIAYSVGANFTPHILTVNEGEDVTMKIMSFSQQGCQAICILSANGTISNVTLRQPTSSGGTLTYEGRFEILSLSGSYITTENGLTKSRSGGMSISLAAPDGRVMGGGLAGLLVAAGPVQVVVASFVPGHQLEQQKPKKPRVEHISMAAPTYVNPTSAEEIRIGLGGVKPIMTPAAFQVHHIFGNGQSSGNSASDDSAPFPENESNPSHADAGVAC 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01470 344 MobiDBLite consensus disorder prediction 33 83 - -
Gma09g01470 344 MobiDBLite consensus disorder prediction 311 344 - -
Gma09g01470 344 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 3 7 331 - -
Gma09g01470 344 Gene3D - 141 276 - -
Gma09g01470 344 MobiDBLite consensus disorder prediction 311 332 - -
Gma09g01470 344 ProSiteProfiles PPC domain profile profile. 136 279 IPR005175 -
Gma09g01470 344 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 7 331 IPR039605 GO:0003680
Gma09g01470 344 SUPERFAMILY AF0104/ALDC/Ptd012-like 138 258 - -
Gma09g01470 344 CDD DUF296 140 254 IPR005175 -
Gma09g01470 344 Pfam Plants and Prokaryotes Conserved (PCC) domain 141 255 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01470 Gma-Chr9 39377744 39382668 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01470 56 270 AT-hook Motif Nuclear Localized (AHL) Family AT5G62260 62.445 1.45e-87 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01470 - - gmx:102667678 621.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01666 16 37694387 37699603 Gma09g01470 09 39377744 39382668 GST
Gma09g01470 09 39377744 39382668 Gma10g01734 10 44503251 44510813 PCT
Gma10g01734 10 44503251 44510813 Gma09g01470 09 39377744 39382668 PCT