Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01459 ATGGAAAAAGCTGTGTTGGTGTTGGCTTTTGTGGGCAAGTTGAGAAGGCACTTTCTGCTGCTTGTTGTGGCAATGGTGCTTGTGCTGTTACTCTCTTCATTTGCTTCACCACTCAGCGATGAAGGACAAGCATTGATGAAGATTAAGGCTTCATTCAGCAATGTAGCAGATGTTCTGCATGATTGGGATGATTTGCATAATGATGACTTCTGTTCTTGGCGCGGAGTCTTGTGCGACAATGTCAGCCTTACTGTGTTTTCTCTGAATTTGTCAAGCTTGAATCTTGGTGGGGAGATATCACCCGCTATTGGTGACTTGGTAACCTTGCAATCCATAGACCTGCAGGGAAATAAACTAACTGGTCAAATTCCAGATGAAATTGGAAACTGTGCTGAACTTATTTATCTGGATTTGTCTGATAATCAACTATATGGTGATTTACCTTTCTCCATATCAAAGCTAAAGCAGCTTGTGTTTCTGAATTTAAAGAGTAATCAGTTGACTGGTCCTATCCCCTCAACATTAACCCAAATTCCAAACTTGAAGACTCTTGATCTTGCACGAAATAGACTCACTGGTGAGATTCCTAGATTGCTCTATTGGAATGAAGTATTGCAGTACCTGGGGTTACGAGGGAACATGTTGAGTGGAACTCTGTCCTCTGATATCTGTCAATTGACTGGTTTGTGGTATTTTGATGTGAGAGGCAACAATTTGACTGGCACCATACCTGACAGCATTGGAAACTGTACAAATTTTGCAATCTTGGATCTTTCATACAATCAGATTTCTGGGGAGATTCCCTATAATATTGGATTTCTTCAAGTGGCTACGTTGTCGCTTCAAGGAAATAGACTAACTGGGAAGATTCCAGAAGTCTTTGGTTTAATGCAAGCCCTTGCCATTTTGGATTTGAGTGAGAATGAGCTAATAGGACCCATCCCTCCCATACTAGGCAATTTGTCTTATACTGGAAAGCTGTATCTTCATGGAAACATGCTTACTGGAACAATACCTCCCGAACTTGGCAATATGTCAAGACTAAGCTACCTACAATTGAATGACAATCAAGTAGTAGGCCAAATCCCTGATGAACTTGGGAAACTCAAACATTTGTTTGAATTGAATCTTGCCAATAATCATCTTGAAGGATCTATTCCACTTAACATTAGCTCATGCACTGCCATGAATAAGTTTAATGTGCATGGAAATCATTTAAGTGGTTCAATTCCTTTGAGCTTTAGCAGCCTTGGAAGCTTGACTTACTTAAATCTTTCTGCAAACAATTTCAAAGGGAGTATACCTGTTGATTTGGGCCATATAATAAATCTTGACACATTGGATCTATCTAGCAATAATTTTTCAGGGTATGTTCCAGGGTCTGTTGGTTATCTTGAGCATCTTCTGACCTTGAACTTGAGCCATAATAGTCTTGAGGGTCCCTTGCCTGCTGAATTTGGGAATCTTAGAAGCATACAGATTTTTGATATGGCATTCAACTATCTGTCGGGTAGCATCCCTCCGGAAATTGGTCAGCTGCAGAATCTTGCGTCTCTGATTTTGAACAACAATGATCTGAGTGGGAAGATTCCAGATCAGCTTACAAATTGCTTAAGTCTTAACTTCCTGAATGTCTCATACAATAACTTATCTGGGGTCATTCCTCTCATGAAGAACTTCTCATGGTTTTCTGCTGACAGCTTCATTGGAAATCCATTATTATGTGGAAATTGGTTGGGATCCATATGTGATCCTTACATGCCAAAATCCAAAGTGGTTTTTTCAAGGGCTGCAATTGTTTGTCTCATTGTTGGTACCATCACATTATTGGCCATGGTAATTATAGCAATCTACAGATCAAGCCAATCAATGCAATTGATTAAAGGATCTAGTGGAACTGGGCAAGGCATGTTGAACATAAGAACTGCTTATGTTTATTGCCCCCCCAAGCTTGTAATTCTTCACATGGGCTTGGCCATCCATACCTTTGATGACATTATGAGAGTTACTGAGAATCTCAATGCGAAGTATATTGTAGGGTATGGTGCCTCTGGTACTGTGTACAAGTGTGCTTTAAAGAATTCCCGGCCAATTGCAATTAAGCGACCATACAACCAGCATCCACACAACTCAAGGGAGTTTGAGACAGAACTTGAAACTATTGGCAATATCAGACACAGGAATCTTGTCACTTTGCATGGTTATGCTCTAACTCCTAATGGAAATCTTCTTTTCTATGACTATATGGAGAATGGCTCTCTGTGGGATCTTCTTCATGGTCCCTTGAAAAAGGTAAAACTTGATTGGGAGGCACGCCTGAGGATTgccatgggagctgctgaaggacttgcttacctccatcatgactgcaatcctagaatcattcacagggatataaagtcctcaaacatcttgctagatgaaaactttgaagctcgtctctctgattttggcattgccaaaTGTTTGTCAACCACAAGAACTCATGTGTCAACGTTTGTTCTTGGAACAATAGGCTATATTGACCCTGAGTATGCCCGGACATCTAGGCTGAATGAAAAATCCGATGTGTATAGCTTTGGAATTGTTCTACTTGAGCTACTAACTGGGAAGAAAGCAGTGGACAACGAttccaacttgcatcacttaATATTATCCAAGGCAGATAACAACACTATAATGGAGACTGTGGATCCTGAGGTGTCTATTACCTGCATGGATCTGACCCATGTTAAGAAGACGTTTCAGCTTGCTCTTCTTTGCACAAAAAGAAATCCTTCCGAGAGGCCAACCATGCATGAGGTTGCCAGGGTTTTGGCATCACTACTCCCAGCACCTCCCAGTAAAAATATATTTGTACCTTCTTCAAACACCATTGATTATGCACAATTTGTGATTCAAAAGGTAAACAAAAACAGCCTTCACACCCCACAAATGGATCAATGGTTTGTTCGCTTTGAGGATGTTGTATCAAATAACAGCCTCTAG 2988 0.3842 MEKAVLVLAFVGKLRRHFLLLVVAMVLVLLLSSFASPLSDEGQALMKIKASFSNVADVLHDWDDLHNDDFCSWRGVLCDNVSLTVFSLNLSSLNLGGEISPAIGDLVTLQSIDLQGNKLTGQIPDEIGNCAELIYLDLSDNQLYGDLPFSISKLKQLVFLNLKSNQLTGPIPSTLTQIPNLKTLDLARNRLTGEIPRLLYWNEVLQYLGLRGNMLSGTLSSDICQLTGLWYFDVRGNNLTGTIPDSIGNCTNFAILDLSYNQISGEIPYNIGFLQVATLSLQGNRLTGKIPEVFGLMQALAILDLSENELIGPIPPILGNLSYTGKLYLHGNMLTGTIPPELGNMSRLSYLQLNDNQVVGQIPDELGKLKHLFELNLANNHLEGSIPLNISSCTAMNKFNVHGNHLSGSIPLSFSSLGSLTYLNLSANNFKGSIPVDLGHIINLDTLDLSSNNFSGYVPGSVGYLEHLLTLNLSHNSLEGPLPAEFGNLRSIQIFDMAFNYLSGSIPPEIGQLQNLASLILNNNDLSGKIPDQLTNCLSLNFLNVSYNNLSGVIPLMKNFSWFSADSFIGNPLLCGNWLGSICDPYMPKSKVVFSRAAIVCLIVGTITLLAMVIIAIYRSSQSMQLIKGSSGTGQGMLNIRTAYVYCPPKLVILHMGLAIHTFDDIMRVTENLNAKYIVGYGASGTVYKCALKNSRPIAIKRPYNQHPHNSREFETELETIGNIRHRNLVTLHGYALTPNGNLLFYDYMENGSLWDLLHGPLKKVKLDWEARLRIAMGAAEGLAYLHHDCNPRIIHRDIKSSNILLDENFEARLSDFGIAKCLSTTRTHVSTFVLGTIGYIDPEYARTSRLNEKSDVYSFGIVLLELLTGKKAVDNDSNLHHLILSKADNNTIMETVDPEVSITCMDLTHVKKTFQLALLCTKRNPSERPTMHEVARVLASLLPAPPSKNIFVPSSNTIDYAQFVIQKVNKNSLHTPQMDQWFVRFEDVVSNNSL 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01459 995 Pfam Protein kinase domain 677 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01459 995 Pfam Leucine Rich repeat 250 266 IPR001611 GO:0005515
Gma09g01459 995 Pfam Leucine Rich repeat 179 194 IPR001611 GO:0005515
Gma09g01459 995 Gene3D Ribonuclease Inhibitor 38 203 IPR032675 -
Gma09g01459 995 SMART LRR_typ_2 417 441 IPR003591 -
Gma09g01459 995 SMART LRR_typ_2 513 537 IPR003591 -
Gma09g01459 995 SMART LRR_typ_2 465 488 IPR003591 -
Gma09g01459 995 SMART LRR_typ_2 178 202 IPR003591 -
Gma09g01459 995 SMART LRR_typ_2 226 250 IPR003591 -
Gma09g01459 995 SMART LRR_typ_2 106 130 IPR003591 -
Gma09g01459 995 SMART LRR_typ_2 369 393 IPR003591 -
Gma09g01459 995 ProSiteProfiles Protein kinase domain profile. 673 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01459 995 ProSitePatterns Serine/Threonine protein kinases active-site signature. 794 806 IPR008271 GO:0004672|GO:0006468
Gma09g01459 995 SUPERFAMILY RNI-like 243 556 - -
Gma09g01459 995 ProSitePatterns Protein kinases ATP-binding region signature. 679 701 IPR017441 GO:0005524
Gma09g01459 995 SUPERFAMILY Protein kinase-like (PK-like) 654 939 IPR011009 -
Gma09g01459 995 Gene3D Phosphorylase Kinase; domain 1 652 748 - -
Gma09g01459 995 Pfam Leucine rich repeat N-terminal domain 39 79 IPR013210 -
Gma09g01459 995 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ERL1-RELATED 29 971 - -
Gma09g01459 995 SMART serkin_6 673 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01459 995 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 29 971 - -
Gma09g01459 995 Gene3D Ribonuclease Inhibitor 204 276 IPR032675 -
Gma09g01459 995 Gene3D Transferase(Phosphotransferase) domain 1 749 950 - -
Gma09g01459 995 SUPERFAMILY L domain-like 38 332 - -
Gma09g01459 995 ProSiteProfiles Leucine-rich repeat profile. 180 202 IPR001611 GO:0005515
Gma09g01459 995 Gene3D Ribonuclease Inhibitor 277 586 IPR032675 -
Gma09g01459 995 Pfam Leucine rich repeat 108 167 IPR001611 GO:0005515
Gma09g01459 995 Pfam Leucine rich repeat 443 502 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01459 Gma-Chr9 39201643 39209630 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01459 107 995 Receptor kinase-like Gene Family AT5G07180 73.850 0.0 1323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Gma09g01459 Pkinase 3.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01459 K20718 - gmx:100800185 1905.57