Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01454 ATGGTAGAGCTCTCAAAAAGTAACACAATCATGCCTTCCAGTAAGACTCTCCTCCTCATAACTAATCTCACCCTTCTCAGTTTTGCAACAACTGAGGCACAAAACGACCCTTTCTATCTATACAAAGATTGTTCCAGCGACAAAACCAGCCCCAACACCTCCTTCCAATTTAACCTCAAGAACCTCCTTTCTTCCCTATCATCCAACGCCACCGGCAACACCCCATTTTACAACGCCACAATCAATGGCGAAAACCCCTCTGACTCTATCTATGGACTTTTCATGTGTAGGGCTGACGTGTCCTCTCACCTCTGCCAACTATGCGTCCGGAATGCAACCCAACAACTATCATCAGAATGCTCCTTATCCAAACAAGCAGTCATATGGTACGAGGAGTGCATGGTTTGGTATTCCACGTCTTTTATTTTCTCCAGTGTGGCCACAACACCTAGTAGTCCCATGAAGAACAGTGGTAAAGTCCCAAAGCCAGAAAGATTCATGCGTTTAGTGTTCAGGACAATAAACCAAACTGCAGATGAAGCATCATTCCAATCAAGTATTGGTAACAATAAGTTCGCAACAAAGGAAGCAACAAACGTGTCAGGAATATCTCAGACTCAAACCCTTTATTGTTTAGCTCAGTGCATACCGAATCTTTCACCACATGATTGTAGAACATGCCTTGATGATGCAATAAGGAAAATTCAAGAGTGTTGTGAAGGAAGGATAGGAGGGAGAGTTCTGTTTCCTAGCTGCAATGTTAGGTATGAAATGTACCCTTTCTACAATGTTCGTTCAGCAACTCCTGTACCAAAGCTTATTCCTGAAACAAAAACTTCCCATGCAGATTCAAATTTATCAGAATTTCCTATTTATCTTTCTCATAATTGCACAAACAAAACCTTCAATGCCAACAACAGTGCTTTCCAAACACACCTCACCACACTCTTATTTAACCTAGCTTCTAATGCCACAACCGGGAACAAGTTTTATACGGCTGATGTGGCTAACACAGTGTTTGGTCTCTTCTTGTGCCGAGACCAAGAGGATCTTCCTTCAGGGCTTTGTGGTGAGTGTGTCAAAAACGCAACGCATGAAATATCATCAAAGTGTGGCTCGTTCCATGAGGCTATAATTTGGTACAGCCAGTGCATGCTTCGCTATTCCTATAGAAATTTTTTCAATGAAATGGAAACAGGTCCTGTGTTTTCTGAGTTGAACACCACCAACAAGGATGATGAACAAAATTTCTTTACGATGAAGTTAGCGAAGGCGTTAGATCAAGCGGCGATCCAGGCAGGGGACAGTGATGAGAAATACGGAAAAAGGACGACAAAATTGAATGATTTGCAAACCCTTTATGCTCTTGCTCAGTGCACACAAAATTTGTCTATTGAAGATTGCAAGGGTTGTCTGGGAATTGTGATTGGAACATCAATTCCATGGTCTCGTTTGGGAAGCATAGGGGGAAGAGTTTTGTATCCTAGCTGCAATATCAGGTTTGAATTGTTCCAATTCTACAAAGACAATGACAAATCTGGGACGTCATCATCACCAGCAGAAAGAAGAAAAGGCAAGTCGCCAATAATTATCTTGATTGTTGTGTTGGCAAGTATTTCTGTGACGTTATTCTTTGCAGCTTACTATTTTCTACATAAAAATGCAAGAAAGAGGCGTGCAGCTATTCTCGAAGATAATTTTGGTCTTGAAATGGCTACTTTAGAGTCGTTGCAATTTGATTTGGCTACCATTATAGCAGCAACTAATAGATTTTCAGACCAGAATAAAATAGGCAAAGGTGGATTTGGAGAAGTTTACAAGGGTATTCTTCTTGATGGATTACAAATAGCTGTAAAGAGATTATCAAAAAGTTCAAAGCAAGGATCAAATGAGTTCAAGAATGAAGTTTTATTAATAGCCAAACTTCAACATAGAAATCTTGTGACTCTAATTGGTTTTTGCCTTGAGGAACAAGAAAAAATACTTATTTATGAATATGTGCCAAACAAGAGCCTTGATTACTTTCTATTTGATTCTCAACCACAAAAGTTAAGTTGGTCCCAACGCTATAATATTATAGGAGGAATTATTCAAGGaattctttatttacatgaacattctagactaaaagttatacatcgtgatctcaaacccagtaatattctattagatgaatgtatgattccaaaaatttcagattttggtctcgccagaattgttgaaataaatcaagaccaagggagtacaagtgtaattgttggaacatatggttatatgtctccagaatatgcaatgttcggacaattttctgagaagtcagatgttttcagttttggtgtcatggttttagagattataagtggaaaaaagaatttcagttcttatgaatcacaccgtattactaatggcctcttaagctatgtttggaaacaatggagtgatcacacacctttgaacatattggacccagatattactgaaaattattctgaaattgagccaatttcttcctcgataATTTCTTAA 2526 0.3317 MVELSKSNTIMPSSKTLLLITNLTLLSFATTEAQNDPFYLYKDCSSDKTSPNTSFQFNLKNLLSSLSSNATGNTPFYNATINGENPSDSIYGLFMCRADVSSHLCQLCVRNATQQLSSECSLSKQAVIWYEECMVWYSTSFIFSSVATTPSSPMKNSGKVPKPERFMRLVFRTINQTADEASFQSSIGNNKFATKEATNVSGISQTQTLYCLAQCIPNLSPHDCRTCLDDAIRKIQECCEGRIGGRVLFPSCNVRYEMYPFYNVRSATPVPKLIPETKTSHADSNLSEFPIYLSHNCTNKTFNANNSAFQTHLTTLLFNLASNATTGNKFYTADVANTVFGLFLCRDQEDLPSGLCGECVKNATHEISSKCGSFHEAIIWYSQCMLRYSYRNFFNEMETGPVFSELNTTNKDDEQNFFTMKLAKALDQAAIQAGDSDEKYGKRTTKLNDLQTLYALAQCTQNLSIEDCKGCLGIVIGTSIPWSRLGSIGGRVLYPSCNIRFELFQFYKDNDKSGTSSSPAERRKGKSPIIILIVVLASISVTLFFAAYYFLHKNARKRRAAILEDNFGLEMATLESLQFDLATIIAATNRFSDQNKIGKGGFGEVYKGILLDGLQIAVKRLSKSSKQGSNEFKNEVLLIAKLQHRNLVTLIGFCLEEQEKILIYEYVPNKSLDYFLFDSQPQKLSWSQRYNIIGGIIQGILYLHEHSRLKVIHRDLKPSNILLDECMIPKISDFGLARIVEINQDQGSTSVIVGTYGYMSPEYAMFGQFSEKSDVFSFGVMVLEIISGKKNFSSYESHRITNGLLSYVWKQWSDHTPLNILDPDITENYSEIEPISSSIIS 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01454 841 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 26 272 - -
Gma09g01454 841 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 521 835 - -
Gma09g01454 841 ProSitePatterns Serine/Threonine protein kinases active-site signature. 711 723 IPR008271 GO:0004672|GO:0006468
Gma09g01454 841 ProSiteProfiles Gnk2-homologous domain profile. 148 261 IPR002902 -
Gma09g01454 841 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 26 272 - -
Gma09g01454 841 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 521 835 - -
Gma09g01454 841 Gene3D - 290 393 IPR038408 -
Gma09g01454 841 Gene3D - 36 141 IPR038408 -
Gma09g01454 841 Gene3D - 149 261 IPR038408 -
Gma09g01454 841 Gene3D - 401 506 IPR038408 -
Gma09g01454 841 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 290 512 - -
Gma09g01454 841 SUPERFAMILY Protein kinase-like (PK-like) 574 815 IPR011009 -
Gma09g01454 841 SMART serkin_6 591 840 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01454 841 ProSiteProfiles Gnk2-homologous domain profile. 399 506 IPR002902 -
Gma09g01454 841 ProSitePatterns Protein kinases ATP-binding region signature. 597 619 IPR017441 GO:0005524
Gma09g01454 841 ProSiteProfiles Gnk2-homologous domain profile. 37 142 IPR002902 -
Gma09g01454 841 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 290 512 - -
Gma09g01454 841 Gene3D Phosphorylase Kinase; domain 1 553 666 - -
Gma09g01454 841 ProSiteProfiles Gnk2-homologous domain profile. 291 393 IPR002902 -
Gma09g01454 841 Pfam Salt stress response/antifungal 297 389 IPR002902 -
Gma09g01454 841 Pfam Salt stress response/antifungal 163 258 IPR002902 -
Gma09g01454 841 Pfam Salt stress response/antifungal 44 139 IPR002902 -
Gma09g01454 841 Pfam Salt stress response/antifungal 413 502 IPR002902 -
Gma09g01454 841 Pfam Protein kinase domain 592 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01454 841 ProSiteProfiles Protein kinase domain profile. 591 841 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01454 841 Gene3D Transferase(Phosphotransferase) domain 1 667 840 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01454 Gma-Chr9 39102828 39107027 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01454 290 835 Receptor kinase-like Gene Family AT4G05200 45.343 1.22e-156 472
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma09g01454 Pkinase 1.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01454 - - gmx:100808174 1620.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01654 16 37542061 37546779 Gma09g01454 09 39102828 39107027 GST