Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01449 GTCATTCGCGAACAATGATCTTGATTATTGTCCTCGCGAGTGTTTCAGTGACACTCTTCTCCTTTGGATACTATTTGCTAAAGAGGAAAGCAAGAAAGAGTGTTAATACTATTCTTAGAGAAAATTTTGGTCATGAAAGTGCCACTTTAAAGCCACTGCAATTCAATTTGGATGTACTTGAAGCAGCAACCAACAACTTTTCACATGATAATAAGATTGGTAAAGGCGGATTTGGGGAAGTTTACAAGGGTATTCTTCTTGATGGTTCACAAATAGCCGTAAAGAGATTATCAAAAAGTTCAAAGCAAGGATCAAATGAGTTCAAGAATGAAGTTTTATTAATAGCCAAACTTCAACACCGAAATCTAGTGACTCTAATTGGTTTTTGCTTTGAGGAAGAAGAAAAAATACTTATTTATGAATATGTGCCAAACAAGAGCCTTGATTACTTTCTATTTGATTCTCAACCGCAAAAGTTAAGCTGGTCTGAACGCTATAATATTATAGGAGGAATTGCTCAAGGAATTCTTTATTTACATGAACATTCTCGACTAAAAGTTATACATCGTGATCTCAAACCCAGTAATGTTCTATTAGATGAATGTATGATTCCAAAAATTTCAGATTTTGGTCTCGCCAGAATTGTTGAAATAAATCAAGACAAAGGAAATACAAGTGTAATTGTTGGAACATATGGTTATATGTCTCCAGAATATGCAATGTTCGGACAATTTTCTGAGAAGTCAGATGTTTTCAGTTTTGGTGTCATGGTTTTAGAGATTATAAGTGGAAAAAAGAATTTCAGTTCTTATGAATCACACCGTATTACTAATGGCCTCTTAAGCTATGTTTGGAAACAATGGAGTGATCACACACCTTTGAACACATTGGACCCAGATATTACTGAAAATTATTCTGAAATTGAGGTCATCAAGTGCATTCAGATTGGTTTATTATGTGTTCAACAAGACCCTGATGCTAGACCTACAATGGTGACAGTTGCTTCATATCTGACTAGTCACCCTATTGAATTGCCAACACCACAAGAGCCTGCATTTTTCTTGCATGCCAATTTCTTCCTCGGTAATTTCTTAACATTCGTAGGGAAAAAAGATTCTTTGCATGATGCTGCTTTCTCGAAGAAACAGATTATATCAGGAAAAACTGAAGTATATCTCGTGCTGACTAGAGATAATTATTGA 1202 0.3502 HSRTMILIIVLASVSVTLFSFGYYLLKRKARKSVNTILRENFGHESATLKPLQFNLDVLEAATNNFSHDNKIGKGGFGEVYKGILLDGSQIAVKRLSKSSKQGSNEFKNEVLLIAKLQHRNLVTLIGFCFEEEEKILIYEYVPNKSLDYFLFDSQPQKLSWSERYNIIGGIAQGILYLHEHSRLKVIHRDLKPSNVLLDECMIPKISDFGLARIVEINQDKGNTSVIVGTYGYMSPEYAMFGQFSEKSDVFSFGVMVLEIISGKKNFSSYESHRITNGLLSYVWKQWSDHTPLNTLDPDITENYSEIEVIKCIQIGLLCVQQDPDARPTMVTVASYLTSHPIELPTPQEPAFFLHANFFLGNFLTFVGKKDSLHDAAFSKKQIISGKTEVYLVLTRDNY 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01449 399 Gene3D Transferase(Phosphotransferase) domain 1 142 344 - -
Gma09g01449 399 SMART serkin_6 66 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01449 399 Pfam Protein kinase domain 67 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01449 399 ProSiteProfiles Protein kinase domain profile. 66 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01449 399 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 2 378 - -
Gma09g01449 399 SUPERFAMILY Protein kinase-like (PK-like) 50 355 IPR011009 -
Gma09g01449 399 ProSitePatterns Protein kinases ATP-binding region signature. 72 94 IPR017441 GO:0005524
Gma09g01449 399 CDD STKc_IRAK 72 338 - -
Gma09g01449 399 ProSitePatterns Serine/Threonine protein kinases active-site signature. 186 198 IPR008271 GO:0004672|GO:0006468
Gma09g01449 399 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 2 378 - -
Gma09g01449 399 Gene3D Phosphorylase Kinase; domain 1 28 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01449 Gma-Chr9 39026910 39066631 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01449 29 357 Receptor kinase-like Gene Family AT3G45860 56.886 2.71e-133 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma09g01449 Pkinase 3.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01449 - - gmx:100807113 646.351