LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma09g01442	ATGGCCAAGACCCTAATGGGAAACGTGGCTTTCTTCCTAACAACCTATCTTCTACTTTTCACAATGTTGTTCCCGGCAAATGCTCAATTTGCTAAGAAGACTTATCTCATTCAAATGGATAAGTCAGCAATGCCAAAAGCCTTCCCCAACCACCTTGAATGGTATTCATCAAAGGTGAAATCAGCACTGTCCACATCTCCAGAAGCTGATATGGACAATGAGGAGAGAATAATCTACACTTACCAGAATGCTTTTCATGGAGTTGCAGCCAAGTTGACTGAAGAAGAAGCTGAGAAGCTAGAGGCTGAAGAAGGTGTTGTGACCATATTCCCTGAAAAAAAGTATGAGCTACACACCACAAGAAGTCCAACATTCCTTGGTCTTGAACCAGAAAAAAGCACTAATATGTGGTCAGAAAAGCTAGCTGGCCATGATGTAATAGTGGGAGTGTTAGACACTGGGATTTGGCCAGAGAGTGAAAGCTTCAAAGATGTAGGCTTGAGACCGGTACCTTCTCATTGGAAAGGTACATGTGAGATTGGAACAGGCTTCACAAATAGTCACTGCAATAAAAAGGTTGTGGGGGCAAGAGTGTTCTACCATGGATATGAAGCAGCAATTGGTAGAATTAATGAGCAAAAAGAGTATAAGTCACCAAGAGATCAAGATGGTCATGGCACTCACACAGCAGCTACAGTTGGTGGCTCTCCTGTGCATGGAGCTAACCTTCTTGGTTATGCTAATGGCACAGCCAGAGGAATGGCACCAGGTACAAGGATTGCAGCTTACAAAGTGTGTTGGATTGGTGGCTGCTTCAGCTCAGACATTGTATCAGCTATTGATAAAGCTGTGGCTGATGGTGTGAATGTTCTTTCCATCTCTTTAGGTGGTGGAGTCTCCTCTTACTACAGGGATAGTTTATCTGTGGCTGCATTTGGAGCAATGGAGAGGGGTGTTTTTGTTTCATGTTCTGCTGGAAATTCAGGACCTGACCCTGCTAGCCTCACAAATGTGTCACCTTGGATCACCACAGTTGGAGCCAGCACAATGGATAGGGATTTTCCTTCAGATGTTAAGCTTGGGAATGGCAAAAAAATTATTGGAGTTTCACTCTATAAAGGGAAAAATGTGCTATCAATTAAGAAACAATACCCTTTGGTGTACTTGGGGAGCAACTCTAGTAGGGTTGATCCAAGATCTATGTGCTTGGAAGGGACTTTGGATCCTAAAGTGGTGTCAGGAAAGATAGTAATTTGTGATAGAGGCCTTAGTCCTAGAGTGCTGAAGGGTCATGTGGTGAGAAGTGCAGGAGGGGTGGGAATGATTCTCACTAACACTGAAGCCAATGGGGAAGAACTGGTTGCAGATTCTCACCTCCTTCCAGCAGTAGCGATAGGAGAGAAAGAAGGAAAAGAACTCAAAAGTTATGTCCTATCAAGTAAAACTGCTACTGCAGCTCTAGCTTTTAAAGGTACAATATTAGGAATAAAACCATCTCCTGTAGTGGCAGCATTTTCATCAAGAGGGCCTAATTTTCTCAGCCTTGAAATTCTGAAGCCTGACTTAGTGGCTCCTGGGGTGAACATTCTTGCTGCATGGAGTGAGGCCATTGGTCCATCAGGTTTGAAAATAGACAACAGAAGAGTGAAGTTCAATATAGTCTCTGGCACCTCAATGTCATGCCCTCATGTGAGTGGCGTAGCAGCTTTGGTCAAGTCTAGGCACCCTGAGTGGAGTCCTGCAGCTATAAAATCTGCTTTGATGACAACATCTTATGTTCTTGACAACACCAAGAAAACACTCAGAGATTCCTCAACTGCCAAACCATCAAGTCCTTATGATCATGGTGCTGGACACATTGACCCTATTAGAGCTCTTGACCCTGGTTTGGTCTATGACATGGTGCCACAGGACTACTTTGAATTTCTGTGCACACAGAATCTGACTCCAACACAGCTAAAAGTTTTTGCCAAATATTCAAACAGATCTTGTAGACACTCTCTTGCAAGTTCAGGGGACTTGAACTACCCAGCCATATCATCGGTGTTTACTCAGAAAACAACCACTTCATTCCCTAGTCCAGTGATTCTTCACAGAATTGTCACCAATGTTGGCCCTCCTGATTCCAAATACCATGTTGTGGTGTCACCATTCAAAGGTGCTTCTATCAAAGTTGAGCCAGAAACCTTGAATTTTACCAGAAAACACCAGAAGCTGTCTTACAAGATTACCTTCAAGCCAAAGGTTCGGCAAACCTCGCCCGAATTCGGAAGTCTAGTATGGAAGGATGGTTTCCACACTGTGAGAAGCCCCATTGTGATAACATGGCTGCCACCACCAATGTGA	2346	0.4386	MAKTLMGNVAFFLTTYLLLFTMLFPANAQFAKKTYLIQMDKSAMPKAFPNHLEWYSSKVKSALSTSPEADMDNEERIIYTYQNAFHGVAAKLTEEEAEKLEAEEGVVTIFPEKKYELHTTRSPTFLGLEPEKSTNMWSEKLAGHDVIVGVLDTGIWPESESFKDVGLRPVPSHWKGTCEIGTGFTNSHCNKKVVGARVFYHGYEAAIGRINEQKEYKSPRDQDGHGTHTAATVGGSPVHGANLLGYANGTARGMAPGTRIAAYKVCWIGGCFSSDIVSAIDKAVADGVNVLSISLGGGVSSYYRDSLSVAAFGAMERGVFVSCSAGNSGPDPASLTNVSPWITTVGASTMDRDFPSDVKLGNGKKIIGVSLYKGKNVLSIKKQYPLVYLGSNSSRVDPRSMCLEGTLDPKVVSGKIVICDRGLSPRVLKGHVVRSAGGVGMILTNTEANGEELVADSHLLPAVAIGEKEGKELKSYVLSSKTATAALAFKGTILGIKPSPVVAAFSSRGPNFLSLEILKPDLVAPGVNILAAWSEAIGPSGLKIDNRRVKFNIVSGTSMSCPHVSGVAALVKSRHPEWSPAAIKSALMTTSYVLDNTKKTLRDSSTAKPSSPYDHGAGHIDPIRALDPGLVYDMVPQDYFEFLCTQNLTPTQLKVFAKYSNRSCRHSLASSGDLNYPAISSVFTQKTTTSFPSPVILHRIVTNVGPPDSKYHVVVSPFKGASIKVEPETLNFTRKHQKLSYKITFKPKVRQTSPEFGSLVWKDGFHTVRSPIVITWLPPPM	781

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma09g01442	781	Pfam	Peptidase inhibitor I9	34	118	IPR010259	-
	Gma09g01442	781	CDD	PA_subtilisin_like	357	485	-	-
	Gma09g01442	781	Gene3D	-	351	494	-	-
	Gma09g01442	781	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	22	775	IPR045051	-
	Gma09g01442	781	Pfam	Subtilase family	143	597	IPR000209	GO:0006508\|GO:0008236
	Gma09g01442	781	PRINTS	Subtilisin serine protease family (S8) signature	143	162	IPR015500	-
	Gma09g01442	781	PRINTS	Subtilisin serine protease family (S8) signature	221	234	IPR015500	-
	Gma09g01442	781	PRINTS	Subtilisin serine protease family (S8) signature	555	571	IPR015500	-
	Gma09g01442	781	Pfam	Fibronectin type-III domain	673	774	IPR041469	-
	Gma09g01442	781	ProSiteProfiles	KRAB-related domain profile.	80	145	IPR003655	GO:0006355
	Gma09g01442	781	Gene3D	Peptidase S8/S53 domain	145	639	IPR036852	GO:0004252\|GO:0006508
	Gma09g01442	781	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	25	118	IPR037045	-
	Gma09g01442	781	ProSiteProfiles	Serine proteases, subtilase domain profile.	114	626	-	-
	Gma09g01442	781	CDD	Peptidases_S8_3	115	592	IPR034197	-
	Gma09g01442	781	ProSitePatterns	Serine proteases, subtilase family, serine active site.	556	566	IPR023828	-
	Gma09g01442	781	SUPERFAMILY	Subtilisin-like	117	630	IPR036852	GO:0004252\|GO:0006508
	Gma09g01442	781	Gene3D	-	643	776	-	-
	Gma09g01442	781	Pfam	PA domain	383	473	IPR003137	-
	Gma09g01442	781	PANTHER	SUBTILISIN-LIKE PROTEASE SBT1.7	22	775	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma09g01442	Gma-Chr9	38760312	38762657	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma09g01442	11	779	Subtilisin-like Serine Gene Family	AT5G51750	68.571	0.0	1097

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma09g01442	-		-	gmx:100803915	1538.47

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma16g01650	16	37486053	37488398	Gma09g01442	09	38760312	38762657	GST
	Gma09g01442	09	38760312	38762657	Gma10g02287	10	50473610	50475958	PCT
	Gma09g01442	09	38760312	38762657	Gma20g01426	20	41383208	41385553	PCT
	Gma10g02287	10	50473610	50475958	Gma09g01442	09	38760312	38762657	PCT
	Gma20g01426	20	41383208	41385553	Gma09g01442	09	38760312	38762657	PCT