Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01437 ATGAACTTGAAACAATACTGTTGTTTCCTCAAAGATGAAGGTCTAAACAAAATACAGGTTTCCAACAAGAAGAACAGTAGGGACTATCCATGGGAAATGTACACTTTGAAGGAGTTGCTTCGTGCAACAAACAACTTTCATCAAGATAATAAGATTGGAGAGGGTGGATTTGGAAGTGTTTATTTTGGTCGAACAAGTAAAAGCATTGCAGTGAAGCGATTGAAGACAATGACTGCAAAGGCAGAGATGGAGTTTGCAGTGGAAGTGGAAGTGTTAGGAAGAGTGAGGCACCAGAATTTGTTGGGATTGAGGGGATTCTATGCAGGAGGAGATGAAAGGTTGATTGTGTATGATTACATGCCTAACCATAGCTTGTTAACTCATTTGCATGGTCCACTTGCTAAGGAATGTCAGCTAGATTGGCCTAGAAGAATGAGCATAGCAATTGGAGCTGCTGAAGGTTTAGCGTATCTGCACCATGAATCAACTCCTCACATCATACACAGAGATATAAAGGCAAGCAATGTTCTTCTAGACCCTGAATTCCAAGCCAAGGTTGCTGATTTTGGTTTTGCAAAGCTGGTACCGGATGGTGTGACCCATCTTACCACAAAAGTTAAGGGCACCCTAGGATATTTGGCACCAGAATACGCCATGTGGGGGAAGGTTTCTGAGAGCTGTGATGTTTACAGCTTTGGAATTTTACTTTTGGAGATTATTAGTGCCAAGAAACCAATTGAGAAATTCCCAGGAGGAGTGAAAAGGGACATTGTTCAATGGGTCACTCCATATGTCAACAAAGGTCTCTTCAACAACATTGCGGATCCAAAGTTGAAGGGGAAATTTGATTTGGAGCAATTGAAAAATGTTACCACCATAGCTCTTAGATGCACCGATAGTAGTGCGGATAAGAGGCCTAGCATGAAAGAGGTGGTGGATTGGCTCAAGAATGGTGTAGGGAGCACTTGGGGAGAAGAGAATATTCCAACTTTAAGTATCAAGAATGGAGACGAAGGAAATGACAAAGATGACAAATTAAAAAATAACTAG 1050 0.4143 MNLKQYCCFLKDEGLNKIQVSNKKNSRDYPWEMYTLKELLRATNNFHQDNKIGEGGFGSVYFGRTSKSIAVKRLKTMTAKAEMEFAVEVEVLGRVRHQNLLGLRGFYAGGDERLIVYDYMPNHSLLTHLHGPLAKECQLDWPRRMSIAIGAAEGLAYLHHESTPHIIHRDIKASNVLLDPEFQAKVADFGFAKLVPDGVTHLTTKVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIISAKKPIEKFPGGVKRDIVQWVTPYVNKGLFNNIADPKLKGKFDLEQLKNVTTIALRCTDSSADKRPSMKEVVDWLKNGVGSTWGEENIPTLSIKNGDEGNDKDDKLKNN 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01437 349 MobiDBLite consensus disorder prediction 330 349 - -
Gma09g01437 349 Gene3D Phosphorylase Kinase; domain 1 10 119 - -
Gma09g01437 349 Pfam Protein kinase domain 46 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01437 349 PANTHER OS01G0750732 PROTEIN 4 342 - -
Gma09g01437 349 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Gma09g01437 349 ProSitePatterns Protein kinases ATP-binding region signature. 52 72 IPR017441 GO:0005524
Gma09g01437 349 Gene3D Transferase(Phosphotransferase) domain 1 120 322 - -
Gma09g01437 349 PANTHER - 4 342 - -
Gma09g01437 349 SUPERFAMILY Protein kinase-like (PK-like) 27 322 IPR011009 -
Gma09g01437 349 SMART serkin_6 46 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01437 349 CDD STKc_IRAK 52 317 - -
Gma09g01437 349 ProSiteProfiles Protein kinase domain profile. 46 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01437 Gma-Chr9 38671448 38673558 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01437 33 311 Trihelix Transcription Factor Family AT1G68690 44.561 3.98e-80 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Gma09g01437 Pkinase 3.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01437 - - gmx:100800710 677.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01645 16 37433194 37435624 Gma09g01437 09 38671448 38673558 GST
Gma09g01437 09 38671448 38673558 Gma10g02283 10 50429500 50431505 PCT
Gma09g01437 09 38671448 38673558 Gma20g01432 20 41438173 41439829 PCT
Gma10g02283 10 50429500 50431505 Gma09g01437 09 38671448 38673558 PCT
Gma20g01432 20 41438173 41439829 Gma09g01437 09 38671448 38673558 PCT