Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01418 ATGGGTAAGGGGGGAATGTCAATTGATGAACATGGAGAAGGCAAAGAAGAGAATATGGCTGCTTGGCTTGTTGGAATAAACTCTCTCAAGATTCAGCCTTTCAAGCTTCCTACTTTGGGACCCCATGATGTCAGAGTTAGAATGAAGGCTGTTGGTATTTGTGGGAGTGATGTTCACTACCTCAAGACACTGAGGTGTGCTCACTTTATAGTTAAAGAACCAATGGTTATTGGTCATGAGTGTGCTGGGATCATAGAAGAAGTTGGCAGTCAAGTGAAGAGTTTGGTGCCTGGTGACCGTGTGGCAATTGAGCCTGGGATCAGTTGTTGGCGTTGCGACCACTGCAAACAGGGTCGATATAACTTATGCGATGATATGAAGTTTTTTGCTACTCCACCAGTTCATGGTTCCCTGGCTAATCAGATAGTGCATCCTGCAGACCTATGTTTTAAGCTGCCAGACAACGTGAGCCTAGAGGAGGGAGCAATGTGTGAACCCTTAAGTGTTGGTGTTCATGCTTGTAGGAGAGCTAATATTGGACCAGAAACATATGTGTTAATCATGGGAGCAGGACCTATAGGACTTGTTACAATGCTTGCAGCTCGTGCTTTTGGGGCACCCAGGACTGTCATTGTGGATGTAGATGACTATCGTTTATCTGTTGCAAAATCACTTGGTGCCGATGACATTGTTAAAGTCTCAACAAACATTCAGGATGTGGCTGAAGAAGTTGTGCAGATACAGAAGGTTATGGGAGCTGATATAGATGTTACCTTTGATTGTGCTGGTTTTGACAAAACCATGTCTACAGCACTGAGTGCTACTCAGCCAGGTGGCAAAGTTTGTCTAGTGGGAATGGGACATTCTGAAATGACTGTCCCACTCACCCCAGCTGCAGCAAGGGAAGTTGATGTGCTTGGAGTTTTTCGCTATATGAACACATGGCCTCTTTGCCTTGAGTTTCTAAGGAGTGGAAAAATCGATGTAAAACCCCTTATAACTCATAGGTTTGGGTTTTCTCAAAAGGAAGTGGAAGAAGCCTTTGAAACAAGTGCTCGTGGTGGTAACGCCATCAAGagcagtgcgcacagaataatgcaaatgatgaggatgatgcaacaggaacagagcatgcaacagaaaccagaaaaggagaagaaagaccaaaacaaggcctcaaatcctagccttgttctgtag 1200 0.4017 MGKGGMSIDEHGEGKEENMAAWLVGINSLKIQPFKLPTLGPHDVRVRMKAVGICGSDVHYLKTLRCAHFIVKEPMVIGHECAGIIEEVGSQVKSLVPGDRVAIEPGISCWRCDHCKQGRYNLCDDMKFFATPPVHGSLANQIVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETYVLIMGAGPIGLVTMLAARAFGAPRTVIVDVDDYRLSVAKSLGADDIVKVSTNIQDVAEEVVQIQKVMGADIDVTFDCAGFDKTMSTALSATQPGGKVCLVGMGHSEMTVPLTPAAAREVDVLGVFRYMNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKSSAHRIMQMMRMMQQEQSMQQKPEKEKKDQNKASNPSLVL 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01418 399 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 78 92 IPR002328 GO:0008270|GO:0016491
Gma09g01418 399 Gene3D - 29 350 - -
Gma09g01418 399 MobiDBLite consensus disorder prediction 372 399 - -
Gma09g01418 399 Gene3D - 169 309 - -
Gma09g01418 399 SMART PKS_ER_names_mod 25 358 IPR020843 GO:0016491
Gma09g01418 399 Pfam Zinc-binding dehydrogenase 192 322 IPR013149 -
Gma09g01418 399 PANTHER L-IDONATE 5-DEHYDROGENASE 13 360 - -
Gma09g01418 399 Pfam Alcohol dehydrogenase GroES-like domain 41 152 IPR013154 -
Gma09g01418 399 SUPERFAMILY GroES-like 18 190 IPR011032 -
Gma09g01418 399 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 328 IPR036291 -
Gma09g01418 399 CDD sorbitol_DH 20 359 IPR045306 GO:0016616
Gma09g01418 399 PANTHER SORBITOL DEHYDROGENASE 13 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01418 Gma-Chr9 38356837 38362222 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01418 31 297 Monolignol Biosynthesis Gene Families AT4G37980 27.338 6.11e-18 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01418 K00008 - gmx:100791559 733.021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g01418 09 38356837 38362222 Gma09g01418 09 38356837 38362222 ECH