Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01415 ATGGCCTCTGCAACAACAACAACACTCTCTCACCATCATCACCTTCCTCTCCTCCTTCATTCTCCTCTTTCCATCAAATTTACCAAACCGCCCCTCTCTCTTTCCCTCTCGCGACGCCCCCTTCTAACGAACCCTCTCCACGCGCGCTTCCTCCTCCCTCCGCCACGCGCCTACGCCGCCGCGCCCGCGTCCGACCCGAATTTCGCCGACCCCGATCCGAAACTCGCCGGGTCGGACCCGGAGAACGCGAGGCCACGGAATGTCATCACGTGGAGCCTCCTCTGCACGCTCCTCATGAAGCACAAGCTGCGCCTCGCCCTCGCGGTCGCAACGCTCTTCGCCTGCTCCACCTGTACCCTATCCATGCCCATCTTTTCCGGACGGTTTTTTGAAGTTCTAATTGGCACTAGACCTGAGCCGTTATGGAAGCTGCTTAGTAAAATTGGAGTTCTGTATGCCCTGGAGCCACTTTTGACTATTATTTTTGTTATAAACATGAACATAGTGTGGGAGAAAATTATGTCAACACTAAGAGCTCAGATCTTTGGAAGAATATTGATTCAAAAGATTGAATTTTTTGACAAATACAAGGTTGGTGAACTCACAGGTTTGCTAACATCTGATTTGGGTTCTCTTAAAAATATAGTCAGTGAGAATGTCTCAAGGGATCGCGGATTCAGAGCATTATCTGAGGTCATTGGAACAATATTCATACTTTTTTCTTTATCCCCACAACTGGCACCCATTCTGGGTGTTCTGATGCTCGCAGTTTCCATTTCAATTGCTGTCTACAAGAGATCTACTTTGCCGGTTTTTAAAGCACATGGGATGGTCCAAGCATCTATATCTGATTGTGTAACAGAAACATTTTCTGCTATTCGAACAGTAAGATCATTTGGGGGTGAAAAGCGCCAGATGTTCACATTTGCTAACCAGGTTCTATCTTTCCAATCAAGTGGGATAAAGCTTGGAACTTTCAAATCTGTAAATGAGTCCTTGACTAGAGTTGCTGTTTATATTTCTTTAATAGCATTGTATTGTCTTGGAGGAAGCAAGGTTAAGGCGGGTGAGCTCTCTGTTGGAACCATGGCATCTTTTATTGGATATACTTTCACTTTAACATTCGCTGTTCAAGGATTGGTTAACACTTTTGGAGATCTTCGTGGAACTTTTGCTGCTGTTGAGAGGATCAACTCTGTTTTATCTGGAGCTCAAGTTGATGATGCCCTTGCCTATGGCTTAGAAAGAGAACTGAGACAAAAAACACTGGATGATGAAAACTATAAATTGATCTTATCAAATATTTCTACTGAGAATAACCAAAAACATTATTTGCATTACATGTCAGCTCTCAAAACATCAAGCAATTTGTTTAGCTTAGCATGGTCTGGAGATATTTGTCTTGAAGATGTATATTTCTCCTATCCTTTAAGGCCAGATGTGGAAATCTTGCGTGGCTTAAATTTAAGACTAAAATTTGGAACTGTAACTGCACTGGTCGGTCCTAGTGGTGCAGGCAAAAGTACTGTAGTACAGCTATTATCTCGTTTTTATGAGCCAACAAGTGGCTGTATAACAGTTGCAGGAGAGGATGTCCGAACATTTGATAAGAGTGAATGGGCTCGGGTTGTATCGATTGTAAATCAAGAGCCTGTTCTGTTTTCGGTTTCTGTTGGGGAAAATATTGCATATGGGCTTCCTGATGAAGATGTTTCTAAAGAAGATGTGATTAAGGCAGCGAAAGCTGCAAATGCTCATGACTTTATAATTTCACTTCCACAGGGCTATGATACACTTGTTGGTGAGCGTGGAGGCCTACTGAGTGGAGGACAAAGACAGAGAATTGCTATTGCCCGGGCTCTCCTAAAGAATGCTCCTATCCTTATACTTGATGAGGCTACCAGTGCCCTTGATGCTGTCAGTGAGCGATTGGTCCAGGATGCTCTCAACCATCTGATGAAGGGAAGGACAACATTAGTAATAGCACATCGATTAAGCACAGTCCAAAATGCATATCAAATTGCACTCTGTTCTGAGGGGCGGATTGCAGAACTAGGCACCCATTTTGAGTTATTGGCTAAGAAAGGCCAATATGCTTCACTGGTTGGCACACAAAGGCTTGCATTTGAATAA 2133 0.4383 MASATTTTLSHHHHLPLLLHSPLSIKFTKPPLSLSLSRRPLLTNPLHARFLLPPPRAYAAAPASDPNFADPDPKLAGSDPENARPRNVITWSLLCTLLMKHKLRLALAVATLFACSTCTLSMPIFSGRFFEVLIGTRPEPLWKLLSKIGVLYALEPLLTIIFVINMNIVWEKIMSTLRAQIFGRILIQKIEFFDKYKVGELTGLLTSDLGSLKNIVSENVSRDRGFRALSEVIGTIFILFSLSPQLAPILGVLMLAVSISIAVYKRSTLPVFKAHGMVQASISDCVTETFSAIRTVRSFGGEKRQMFTFANQVLSFQSSGIKLGTFKSVNESLTRVAVYISLIALYCLGGSKVKAGELSVGTMASFIGYTFTLTFAVQGLVNTFGDLRGTFAAVERINSVLSGAQVDDALAYGLERELRQKTLDDENYKLILSNISTENNQKHYLHYMSALKTSSNLFSLAWSGDICLEDVYFSYPLRPDVEILRGLNLRLKFGTVTALVGPSGAGKSTVVQLLSRFYEPTSGCITVAGEDVRTFDKSEWARVVSIVNQEPVLFSVSVGENIAYGLPDEDVSKEDVIKAAKAANAHDFIISLPQGYDTLVGERGGLLSGGQRQRIAIARALLKNAPILILDEATSALDAVSERLVQDALNHLMKGRTTLVIAHRLSTVQNAYQIALCSEGRIAELGTHFELLAKKGQYASLVGTQRLAFE 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01415 710 ProSitePatterns ABC transporters family signature. 607 621 IPR017871 GO:0005524
Gma09g01415 710 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 466 704 IPR003439 GO:0005524
Gma09g01415 710 Pfam ABC transporter 484 635 IPR003439 GO:0005524
Gma09g01415 710 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 106 389 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma09g01415 710 Gene3D - 459 708 IPR027417 -
Gma09g01415 710 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 53 708 IPR039421 -
Gma09g01415 710 SMART AAA_5 493 667 IPR003593 -
Gma09g01415 710 PANTHER ABC TRANSPORTER B FAMILY MEMBER 28 53 708 - -
Gma09g01415 710 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 458 705 IPR027417 -
Gma09g01415 710 Pfam ABC transporter transmembrane region 107 376 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma09g01415 710 CDD ABC_MTABC3_MDL1_MDL2 466 705 - -
Gma09g01415 710 CDD ABC_6TM_TAP_ABCB8_10_like 108 397 - -
Gma09g01415 710 SUPERFAMILY ABC transporter transmembrane region 94 402 IPR036640 GO:0005524|GO:0016021
Gma09g01415 710 Gene3D ABC transporter type 1, transmembrane domain 78 403 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01415 Gma-Chr9 38213174 38220072 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01415 463 710 Calmodulin-binding Proteins AT2G36910 54.582 2.63e-74 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01415 K05657 - gmx:100791034 1287.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g01415 09 38213174 38220072 Gma09g01415 09 38213174 38220072 ECH