Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01403 ATGACACCATCACGAGTGGCAGGTGGATTAACCCAATCATCATCAAATTCTGGAATTTTCTATCAAGGAGACGGGCAGTCACAGAATGTAGTTGACTCTCACTTAAGCTCATCTTTTGTTAACTCGTCTAGTACGGTTCCAGGAGCTGGTCGTTCAAACCTCGGTCCGGTTTCTGGGGATATTAATAATGCAGTTTTGAACACTGTGGCAAACTCAGCACCAAGTGTTGGAGCCAGTTCTTTAGTCACGGATGCAAATTCTTCTCTCTCTGGTGGCCCCCATTTGCAGAGAAGTACCAGTGTTAACACAGACTCTTACTTACGATTACCTGCCTCACCTATGTCATTTACATCGAATAATATTAGTATTTCTGGCTCATCAGTGATGGATGGTTCATCTGTAGTACAGCAGAGCTCTCATCAAGATCAGAATGTTCAACAATTGCAGCAGAATAAGCAGCAGCCGCAGGGTGCTTCAAGTGCTACGTCTTTGCCTGCATCTCAAACCGGCCCTTCTACGCTCCAAATGGGTGCACAAGTCCCGGGATCTTTCATTCAAGATCCAAATAATATGTCTCACTTGTCGAAGAAAAATAGACTGGATACCAAACAGGAGGATATGATGCAACAACAGGTTATACAACAGCTTCTTCAGAGACAAGATTCCATGCAATTCCAGGGTCGTAATCCCCAGTTACAGGCTTTCCTTCAGCAGCAGCAGCAGCAGCAGCAGAGACTGAGACAACAACAGATGTTTCAGCAAATGCCACAATTACACCGAGCGCACTTGCAGCAGCAACAACAACAACAACAACAACAAATGCAATTGAGGCAGCAGCAGCAACAACAACAACAACAAGTGATGCAGCCCTCTTCTGCTGTCAAGCGGCCATATGAGAGTAGTGTTAGTGGGGTATGTGCCCGTCGATTGATGCAGTATCTCTATCATCAAAGGCAACGACCAAATGATAATAGTATTGCCTATTGGAGAAAATTTGTGGCTGAATATTACTCTCTTCGTGCAAAGAAACGATGGTGCTTGTCATTATATAGTAATGTTGGGCATCATGCACTTGGTGTTTTTCCCCAAGCATCTATGGATGCATGGCACTGTGACATATGTGGTTCTAAATCTGGAAGGGGATTTGAGGCAACTTATGAAGTGTTACCTAGGCTTAATGAAATCAAATTTGGCAGTGGAGTAATTGATGAACTATTGTTTCTGGACATGCCACGTGAAATGAGATTCGCTTCTGGTGCAATGATGTTAGAATATGGAAAAGCAGTTCAAGAGAGTGTATATGAGCAGCTTCGTGTTGTTCGTGAAGGTCAACTTCGTATCATATTCACTCAAGACTTGAAGATATTGTCTTGGGAGTTCTGTGCAAGGCGCCATGAAGAACTTCTTCCTCGAAGGTTGGTTGCACCACAGGTCAACCAATTAATTCAGGTAGCTCAAAAATGTCAGAGTACAATTGCTGAAAGTGGGGCGGATTGGGTTTCTCAGCAAGATTTGCAAACAAACAGCAACATGGTATTGACAGCAGGGCGCCAGCTTGCAAAGATTTTGGAGTTGCAATCACTGAATGACTTAGGCTTTTCTAAAAGATATGTGAGATGTTTGCAGAAAGATAGAGGGTCTAAATTTTGGGTCTATGAGGATGATTTGGTGAAACATTTAAACCAAGGTTCTACAAGATTCTTTAGAGGTTAA 1713 0.4308 MTPSRVAGGLTQSSSNSGIFYQGDGQSQNVVDSHLSSSFVNSSSTVPGAGRSNLGPVSGDINNAVLNTVANSAPSVGASSLVTDANSSLSGGPHLQRSTSVNTDSYLRLPASPMSFTSNNISISGSSVMDGSSVVQQSSHQDQNVQQLQQNKQQPQGASSATSLPASQTGPSTLQMGAQVPGSFIQDPNNMSHLSKKNRLDTKQEDMMQQQVIQQLLQRQDSMQFQGRNPQLQAFLQQQQQQQQRLRQQQMFQQMPQLHRAHLQQQQQQQQQQMQLRQQQQQQQQQVMQPSSAVKRPYESSVSGVCARRLMQYLYHQRQRPNDNSIAYWRKFVAEYYSLRAKKRWCLSLYSNVGHHALGVFPQASMDAWHCDICGSKSGRGFEATYEVLPRLNEIKFGSGVIDELLFLDMPREMRFASGAMMLEYGKAVQESVYEQLRVVREGQLRIIFTQDLKILSWEFCARRHEELLPRRLVAPQVNQLIQVAQKCQSTIAESGADWVSQQDLQTNSNMVLTAGRQLAKILELQSLNDLGFSKRYVRCLQKDRGSKFWVYEDDLVKHLNQGSTRFFRG 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01403 570 Coils Coil 263 286 - -
Gma09g01403 570 MobiDBLite consensus disorder prediction 127 194 - -
Gma09g01403 570 Pfam LIM-domain binding protein 309 542 IPR029005 -
Gma09g01403 570 PANTHER LIM DOMAIN-BINDING PROTEIN 5 151 IPR029005 -
Gma09g01403 570 PANTHER LIM DOMAIN-BINDING PROTEIN 161 542 IPR029005 -
Gma09g01403 570 MobiDBLite consensus disorder prediction 1 25 - -
Gma09g01403 570 MobiDBLite consensus disorder prediction 127 193 - -
Gma09g01403 570 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 5 151 - -
Gma09g01403 570 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 161 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01403 Gma-Chr9 37897086 37918888 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01403 304 542 C2H2 Transcription Factor Family AT1G43850 60.251 2.59e-95 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01403 - - gmx:100789452 895.96