Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01402 ATGACACCATCACGAGTGGCAGGTGGATTAACCCAATCATCATCAAATTCTGGAATTTTCTATCAAGGAGACGGGCAGTCACAGAATGTAGTTGACTCTCACTTAAGCTCATCTTTTGTTAACTCGTCTAGTACGGTTCCAGGAGCTGGTCGTTCAAACCTCGGTCCGGTTTCTGGGGATATTAATAATGCAGTTTTGAACACTGTGGCAAACTCAGCACCAAGTGTTGGAGCCAGTTCTTTAGTCACGGATGCAAATTCTTCTCTCTCTGGTGGCCCCCATTTGCAGAGAAGTACCAGTGTTAACACAGACTCTTACTTACGATTACCTGCCTCACCTATGTCATTTACATCGAATAATATTAGTATTTCTGGCTCATCAGTGATGGATGGTTCATCTGTAGTACAGCAGAGCTCTCATCAAGATCAGAATGTTCAACAATTGCAGCAGAATAAGCAGCAGCCGCAGGGTGCTTCAAGTGCTACGTCTTTGCCTGCATCTCAAACCGGCCCTTCTACGCTCCAAATGGGTGCACAAGTCCCGGGATCTTTCATTCAAGATCCAAATAATATGTCTCACTTGTCGAAGAAAAATAGACTGGATACCAAACAGGAGGATATGACGCAACAACAGGTTATACAACAGCTTCTTCAGAGACAAGATTCCATGCAATTCCAGGGTCGTAATCCCCAGTTACAGGCTTTCCTTCAGCAGCAGCAGCAGCAGCAGCAGAGACTGAGACAACAACAGATGTTTCAGCAAATGCCACAATTACACCGAGCGCACTTGCAGCAGCAACAACAACAACAACAACAAATGCAATTGAGGCAGCAGCAGCAACAACAACAACAACAACAAGTGATGCAGCCCTCTTCTGCTGTCAAGCGGCCATATGAGAGTAGTGTTAGTGGGGTATGTGCCCGTCGATTGATGCAGTATCTCTATCATCAAAGGCAACGACCAAATGATAATAGTATTGCCTATTGGAGAAAATTTGTGGCTGAATATTACTCTCTTCGTGCAAAGAAACGATGGTGCTTGTCATTATATAGTAATGTTGGGCATCATGCACTTGGTGTTTTTCCCCAAGCATCTATGGATGCATGGCACTGTGACATATGTGGTTCTAAATCTGGAAGGGGATTTGAGGCAACTTATGAAGTGTTACCTAGGCTTAATGAAATCAAATTTGGCAGTGGCGTAATTGATGAACTATTGTTTCTGGACATGCCACGTGAAATGAGATTCGCTTCTGGTGCAATGATGTTAGAATATGGAAAAGCAGTTCAAGAGAGTGTATATGAGCAGCTTCGTGTTGTTCGTGAAGGTCAACTTCGTATCATATTCACTCAAGACTTGAAGATATTATCTTGGGAGTTCTGTGCAAGGCGCCATGAAGAACTTCTTCCTCGAAGGTTGGTTGCACCACAGGTCAACCAGTTAGTTCAGGTAGCTAAAAAATGTCAAAGTACAATTGCTGAAAGTGGGTCTGATGGGGTTTCTCAACAAGACATTCAAACAAACGGCAACATGTTGTTGACAGCTGGGGGTCAGCTTGCGAAGATTTTGGAGATGCAATCACTAAATGAGTTGGGCTTTTCTAAAAGATATGTGAGATGTTTGCAAATTTCGGAAGTTGTCAATAGCATGAAAGACCTAATAGATATCTGTGCTGAGCACAAAATTGGGGCAATTGAGAGCTTAAAAAATTATCCTCGACTTGCGACAGCCTCAAAGCACCAGATGCAAAAGATGCAGGAAATGGAACAGCTAGGAAATGTTCAATGTCTGCCAACTGATCAAAACACACTCAATAAGCTAATGGCTCTGAATCCTGGATTGAACAACCATATAAACAACTCTCATAATATGGTAAATCGTGGTGCTTTGAGTGGGTCAGCCCAAGCAGCTTTAGCACTGAACAACTACCAAAATCTTCTCATGAGGCAAAATTCAACGAATTCTAGCCCTGGCTCACTTCAGCGGGAAGGGTCCTCTTTCAATAATTCAAACCAGAGTCCCTCTTCAGCTTTGCAAGGAGCTAGTCCTGCTTTAATTTCAGGCTCAATGCAGAATTCATCTGTTAGTGGTTTCCCAAGTCCCCATCTACCCCCACAGCAGCAGCAACACCACCTACAACAGCGCTCATTAAGTTCAAATGCTTTACTGCAACAAAATCATCATGGTTCCCAAGGAAATCAAGCTCTACAGCAGCAGCAGATGATCCATCAACTGCTGCAGGAGATGTCAAATAACAATGGGGGAATGCAACCACTGTCTCTTGGTGGACCCAATGCAAAGAATGCAATGGGTTTTGGAGGCCATActccatccttaagcggaggttctgccaatgttcctccatccttaagcggaggttctgccaatgttccAGGAAACAATGGACCTATGTCAAGGATTAATAGCTTCAAAACAGCTTCAAATAGTGATTCTTCTGCAGTTGGTGGCAACAATCGATTCAACCAGAGAACATCTGACATGCCACAACATTTGCAAAATGTGGTTCAGGATATTGGCAATGAATTCACGGATAATCCCTTCTTAAACAGTGATCTTGATGATAACATGGGTTTTGGCTGGAAGGCATGA 2610 0.4215 MTPSRVAGGLTQSSSNSGIFYQGDGQSQNVVDSHLSSSFVNSSSTVPGAGRSNLGPVSGDINNAVLNTVANSAPSVGASSLVTDANSSLSGGPHLQRSTSVNTDSYLRLPASPMSFTSNNISISGSSVMDGSSVVQQSSHQDQNVQQLQQNKQQPQGASSATSLPASQTGPSTLQMGAQVPGSFIQDPNNMSHLSKKNRLDTKQEDMTQQQVIQQLLQRQDSMQFQGRNPQLQAFLQQQQQQQQRLRQQQMFQQMPQLHRAHLQQQQQQQQQMQLRQQQQQQQQQQVMQPSSAVKRPYESSVSGVCARRLMQYLYHQRQRPNDNSIAYWRKFVAEYYSLRAKKRWCLSLYSNVGHHALGVFPQASMDAWHCDICGSKSGRGFEATYEVLPRLNEIKFGSGVIDELLFLDMPREMRFASGAMMLEYGKAVQESVYEQLRVVREGQLRIIFTQDLKILSWEFCARRHEELLPRRLVAPQVNQLVQVAKKCQSTIAESGSDGVSQQDIQTNGNMLLTAGGQLAKILEMQSLNELGFSKRYVRCLQISEVVNSMKDLIDICAEHKIGAIESLKNYPRLATASKHQMQKMQEMEQLGNVQCLPTDQNTLNKLMALNPGLNNHINNSHNMVNRGALSGSAQAALALNNYQNLLMRQNSTNSSPGSLQREGSSFNNSNQSPSSALQGASPALISGSMQNSSVSGFPSPHLPPQQQQHHLQQRSLSSNALLQQNHHGSQGNQALQQQQMIHQLLQEMSNNNGGMQPLSLGGPNAKNAMGFGGHTPSLSGGSANVPPSLSGGSANVPGNNGPMSRINSFKTASNSDSSAVGGNNRFNQRTSDMPQHLQNVVQDIGNEFTDNPFLNSDLDDNMGFGWKA 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01402 869 Coils Coil 263 285 - -
Gma09g01402 869 PANTHER LIM DOMAIN-BINDING PROTEIN 161 868 IPR029005 -
Gma09g01402 869 PANTHER LIM DOMAIN-BINDING PROTEIN 5 151 IPR029005 -
Gma09g01402 869 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 161 868 - -
Gma09g01402 869 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 5 151 - -
Gma09g01402 869 Pfam LIM-domain binding protein 309 569 IPR029005 -
Gma09g01402 869 MobiDBLite consensus disorder prediction 127 170 - -
Gma09g01402 869 MobiDBLite consensus disorder prediction 247 270 - -
Gma09g01402 869 MobiDBLite consensus disorder prediction 652 715 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01402 Gma-Chr9 37862411 37867984 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01402 304 573 C2H2 Transcription Factor Family AT1G43850 59.630 4.40e-107 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01402 - - gmx:100789452 1404.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01620 16 37074473 37080317 Gma09g01402 09 37862411 37867984 GST