Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01401 ATGACACCTTCTCGGGTGTCCGGAAGTTTAACTCGATCATCTTCACATTCTGGAATTTTCTTTCAAGGAGATGGGCAGTCACAGAATATAGTTAACTCTCACTTAAGCTCATCTTTTGTTAACTCGTCTAGCACGGTTCCAGGAGCTGGTTGTTCAAACCTCGGTCCAGTTTCTGGGGATATTAATAATGCAGTTTTGAACACTGTGACAAACTCAGCACCAAGTGTTGGAGCCAGTTCTTTAGTCACGGATGCAAATTCTGCTCTCTCTAGTGGCCCCCATTTGCAGAGAAGCGCCAGTGTTAACACAGACTCTTACTTACGATTACCTGCCTCACCTATGTCATTTACATTGAATAATATTAGTATTTCTGGCTCATCAGTGATGGATGGTTCCTCTGTACAGAATCAGCAGCAGCCGCAGGGTGCTTCAAGTGCTACATCTTTGCCTGCATCACAAACTAGACCATCTCTACTCCAAATGGGCGCACAAGTCCCAAGATCTTTCATTCAAGATCCAAATAATATGTCTCATCTGTCAAAGAAACCTAGAATGGATATCAAACAGGAAGATATAATGCAGCAGCAGGTTATACAACAGATTCTTCAGAGACAAGATTCCATGCAATTCCAGGGTCGTAATCCACAGTTACAGGCTTTTCTTCAGCAGCAACAGAGACTAAGACAACAACAAATCTTTCAGTCAATGCCACAATTGCAGCGAGCGCACTTGCAACAACAGCGGCAGCAATTACAACAACAAGTGATGCAGCCCTCTTCTGCTGGCAAGCGTCCATATGACAGTGGTGTTAGTGGGGTATGTGCCCGTCGATTGATGCAGTATCTCTATCATCAAAGGCAAAGGCCAAATGATAATAGTATTGCCTATTGGATAAAATTTGTGGCTGAATATTACTCTCCTCGTGCAAAGAAACGGTGGTGCTTGTCATTATATAGCAATGTTGGGCATCATGCACTTGGTGTTTTCCCCCAAGCAGCTATGGATGCATGGCAGTGTGACATATGTGGTTCTAAATCTGGAAGGGGATTTGAGGCAACTTATGAAGTGTTACCTAGGCTTAATGAAATAAAATTTGGCAGTGGAGTAATTGATGAACTTTTGTTTCTGGACTTGCCACGTGAAACAAGATTTCCTTCTGGTGCGATGATGTTGGAATATGCAAAAGCAGTTCAAGAGAGTGTATATGAGTCGCTTCGTGTTGTTCGTGAAGGTCAACTTCGCATCATATTCACTCAAGACTTGAAGATCTTATCATGGGAGTTCTGTGCAAGACGCCATGAAGAACTTCTTCCTCGAAGGTTGGTTGCACCACAGATTTCAGAGGTTGTCAATAGCATGAAAGACCTAATAGATATCTGTGCAGAGCACAAAATTGGTGCAATTGAGAGTTTGAAAAATTATCCTCTACTAGCAACAGCCTCAAAGGTCCAGATGCAAAAGATGCAGGAAATGGAACAGCTGGCAAATGTACAAGGTCTGCCAACTGATCGAAACACACTCAATAAGCTAATGGCACTGAATCCTGGAATGAACAACCATATGAACAACACTCATAATATGGTTAATCGTGGTGCTTTGAGTGGGTCACCCCAAGCTGCTTTAGCACTGAACAACTACCCAAATCTTCTGATGAGGCAAAATTCAATGAATTCTAGCCCTGGCTCACTTCATCGAGAAGGGTCCTTGTTCAATAATTCAAACCTGAGTCCCTCTTCTGCTTTGCAAGGAGCTGGTCCTGCTTTAATTCCAGGCTCAATGCAGAACTCGCCTGTAGGCAGTTTCCCAAGTCCCCATCTACCCCCACAGCAGCAGCAGCAACAACAAGAAGTCCTTCAACAGCGCACATTAAGTGCAAATGGTTTACTTCAACAAAATCATTCACCGGGTTCCCAAGGAAATCAAACTCTACAGCAGCAGCAGATGATCCAGCAACTGCTGCAGGAGATGTCAAATAACAATGGGGGAATGCAACCACAGTCTCTTGGTGGACTCACTGCAAATGGGAATATTGCAAAGAATGCAATGGGTTTTGGGGGCCATACTCCATCCTTAAGTGGAGGTTCTGCCAATGTTCCTGGAAACAATGGACCTATGTCAAGGAATAATAGCTTCAAAACAGCTTCAAATAGTGATTCTTCTGCAGCAGGTGGCAACAATGGATTCAATCAGAGAACATCTGATATGCCACAAAATCTACATTTGCAAGATGTGGTTCAGGATATTGGTAATGAGTTCTCGGATAACCCCTTCTTTAACAGTGATCTTGATGACAACATGGGTTTCAGCTGGAAGGCATGA 2319 0.4338 MTPSRVSGSLTRSSSHSGIFFQGDGQSQNIVNSHLSSSFVNSSSTVPGAGCSNLGPVSGDINNAVLNTVTNSAPSVGASSLVTDANSALSSGPHLQRSASVNTDSYLRLPASPMSFTLNNISISGSSVMDGSSVQNQQQPQGASSATSLPASQTRPSLLQMGAQVPRSFIQDPNNMSHLSKKPRMDIKQEDIMQQQVIQQILQRQDSMQFQGRNPQLQAFLQQQQRLRQQQIFQSMPQLQRAHLQQQRQQLQQQVMQPSSAGKRPYDSGVSGVCARRLMQYLYHQRQRPNDNSIAYWIKFVAEYYSPRAKKRWCLSLYSNVGHHALGVFPQAAMDAWQCDICGSKSGRGFEATYEVLPRLNEIKFGSGVIDELLFLDLPRETRFPSGAMMLEYAKAVQESVYESLRVVREGQLRIIFTQDLKILSWEFCARRHEELLPRRLVAPQISEVVNSMKDLIDICAEHKIGAIESLKNYPLLATASKVQMQKMQEMEQLANVQGLPTDRNTLNKLMALNPGMNNHMNNTHNMVNRGALSGSPQAALALNNYPNLLMRQNSMNSSPGSLHREGSLFNNSNLSPSSALQGAGPALIPGSMQNSPVGSFPSPHLPPQQQQQQQEVLQQRTLSANGLLQQNHSPGSQGNQTLQQQQMIQQLLQEMSNNNGGMQPQSLGGLTANGNIAKNAMGFGGHTPSLSGGSANVPGNNGPMSRNNSFKTASNSDSSAAGGNNGFNQRTSDMPQNLHLQDVVQDIGNEFSDNPFFNSDLDDNMGFSWKA 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01401 772 MobiDBLite consensus disorder prediction 552 618 - -
Gma09g01401 772 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 623 770 - -
Gma09g01401 772 MobiDBLite consensus disorder prediction 552 581 - -
Gma09g01401 772 Pfam LIM-domain binding protein 277 495 IPR029005 -
Gma09g01401 772 MobiDBLite consensus disorder prediction 128 154 - -
Gma09g01401 772 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 445 583 - -
Gma09g01401 772 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 5 148 - -
Gma09g01401 772 MobiDBLite consensus disorder prediction 688 737 - -
Gma09g01401 772 PANTHER LIM DOMAIN-BINDING PROTEIN 157 446 IPR029005 -
Gma09g01401 772 PANTHER LIM DOMAIN-BINDING PROTEIN 5 148 IPR029005 -
Gma09g01401 772 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 157 446 - -
Gma09g01401 772 PANTHER LIM DOMAIN-BINDING PROTEIN 445 583 IPR029005 -
Gma09g01401 772 PANTHER LIM DOMAIN-BINDING PROTEIN 623 770 IPR029005 -
Gma09g01401 772 MobiDBLite consensus disorder prediction 690 737 - -
Gma09g01401 772 MobiDBLite consensus disorder prediction 593 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01401 Gma-Chr9 37845721 37853640 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01401 272 449 C2H2 Transcription Factor Family AT1G43850 62.921 2.92e-76 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01401 - - gmx:100816886 1050.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01619 16 37065060 37072604 Gma09g01401 09 37845721 37853640 GST