Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01382 ATGGAAGGCCATAGCGAGATGGGTCAAATCGGAGAAAGTTTTGATACTAGTAATTTGCTGGGGAGGCTGAGGGACGATGAGTATGAAAGCCGGTCTGGAAGTGACAATTTTGATGGCGGATCTGGTGATGACCAGGATGCTGGGGATGATCAGCCACATAAAAAGAAGAAGAAATACCACAGACACACCCCTCAACAAATTCAGGAGCTTGAAGCGTTTTTCAAGGAGTGTCCTCATCCTGATGAGAAGCAAAGAACTGATCTTAGCAAGAGGCTTGGCTTGGAGAACAAGCAAGTCAAGTTCTGGTTTCAGAATCGACGAACCCAAATGAAGACACAACTGGAACGCCATGAGAACATGATTCTTAGGCAGGAAAACGACAAGCTCCGAGCTGAGAACAGTGTAATGAAGGATGCTTTGGCAAATCCGACATGTAACAACTGTGGTGGCCCAGCCATTCCTGGTCAAATTTCCTTGGAGGAGCACCAAACTAGAATGGAAAATGCTCGACTGAAGGATGAACTGAACCGAATATGTGCATTGGCAAACAAGTTCCTGGGCCGGCCACTCTCGCCACTGGCCAGTCCTATGGCTCTGCCACCCTCAAATTCTGGTCTAGAGCTTGCTATTGGAAGAAATGGAATTGGTGGTCCAAGCAATTTTGGCATGTCCTTGCCAATGGGATTTGATGTGGGAGATGGAGTTATGGGCTCCTCACCTGGGATGTCTAGTATGGGTGCTAGATCACCAATGGGAATGATGGGAAATGAAATCCAGCTTGAGAGATCTATGCTTTTAGACCTTGCATTAAATGCTATGAATGAATTAATTAAGATGGCTCAGCCAGATACCTCTCTTTGGATTAAGAGCTCTGATGGCAGGAATGAAGTACTCAACCATGATGAGTATGCAAGACTGTTTTCTCCTTATGTTGGATCAAAACCTGCTGGTTATGTGACTGAAGCTACAAGAGGGACCGGAGTAGTACCAGCCAGCAGTTTGGGCATTGTTGAAACATTGATGGATGTGGATCGATGGGCGGAGATGTTTTCATCTATGATTGCTAGTGCTGCCACTTTGGAAGTACTGTCTAGTGGCATGGGTGAAAGCAGAAGTGGAGCTTTGCAAGTGATGCTTGCTGAGGTTCAATTGCTTTCTCCACTAGTCCCTGCTCGTTCATTGAGTTTCCTCAGGTATAGCAAGCAGCACGGCGAAGGTGTATGGGCTGTGGTTGATGTTTCAGTTGACATTGGTCGTAATGTTACCAATTCACATCCATTAATGAGCTGCAGGAGGCTTCCCTCTGGCTGTGTTATTCAGGATATGCCCAATGGTTTCTCCAAGATTACTTGGGTTGAACATTCCCAATATGACGAGAGTGTTGTCCACCAACTTTATCGCCCATTGGTTAGTTCTGGCATTGGCTTTGGTGCTCAGAGATGGATTGCCACCCTCTTAAGGCAGTGTGACTGCTTGGCAATCCTCATGTCTCAAATCCCATCTGAGGACCCCACAGTCATTAGCCTAGAGGGTAAGAAAAACATGCTGAAGCTCGCACAACGCATGACCGAGTACTTCTGCTCAGGGATCTGTGCTTCGTCTGTGCGCAAGTGGGAAATACTGAACATTGGTAATCTGGCTGATGACATGAGAATCATGGCCCGGAAAATCAATATGGATGACCCAACTGAGGCTCCTGGCATTGTGCTGAGTGCTTCAACTTCTGTTTGGATGCCGGTGTCACGGCAAAGGGTGTTTGATTTTCTGCGTGATGAAAATTTGAGAGGCGAGTGGGACATGCTGTCCAAAGATGGACCAATGAAGGAGATGCTCCATATTGCTAAAGGACAAGATCGTGGAAATTGTGTTTCCATCCTTCATTCTGCTAATAGCGAGTGCAATGTGCTATATCTGCAAGAATCATGGACTGATGCTTCCGGCTCATTGGTAGTGTATTCCCCGATCAACATGCAAGCCTTGAACATGGTGATGAACTGTGGAGATTCATCATTTGTCGCTCTCCGCCCATCAGGCTTTGCTATTCTGCCAGATGGCGCTTCAAACAACGGTGATGGCAGTGATGGTGGTGGCAGCTGCCTGCTTACAGTTGGGTTACAAATGTTGCCAAATGGAGACCAATCAACCAAGTTCACAATGGAGTCAGTTGTTACTGTCAATAGCCTCATCTCAAACACCATTCAGAAGGTCAAAGATGCACTTGGAGTTGCGTGA 2232 0.4664 MEGHSEMGQIGESFDTSNLLGRLRDDEYESRSGSDNFDGGSGDDQDAGDDQPHKKKKKYHRHTPQQIQELEAFFKECPHPDEKQRTDLSKRLGLENKQVKFWFQNRRTQMKTQLERHENMILRQENDKLRAENSVMKDALANPTCNNCGGPAIPGQISLEEHQTRMENARLKDELNRICALANKFLGRPLSPLASPMALPPSNSGLELAIGRNGIGGPSNFGMSLPMGFDVGDGVMGSSPGMSSMGARSPMGMMGNEIQLERSMLLDLALNAMNELIKMAQPDTSLWIKSSDGRNEVLNHDEYARLFSPYVGSKPAGYVTEATRGTGVVPASSLGIVETLMDVDRWAEMFSSMIASAATLEVLSSGMGESRSGALQVMLAEVQLLSPLVPARSLSFLRYSKQHGEGVWAVVDVSVDIGRNVTNSHPLMSCRRLPSGCVIQDMPNGFSKITWVEHSQYDESVVHQLYRPLVSSGIGFGAQRWIATLLRQCDCLAILMSQIPSEDPTVISLEGKKNMLKLAQRMTEYFCSGICASSVRKWEILNIGNLADDMRIMARKINMDDPTEAPGIVLSASTSVWMPVSRQRVFDFLRDENLRGEWDMLSKDGPMKEMLHIAKGQDRGNCVSILHSANSECNVLYLQESWTDASGSLVVYSPINMQALNMVMNCGDSSFVALRPSGFAILPDGASNNGDGSDGGGSCLLTVGLQMLPNGDQSTKFTMESVVTVNSLISNTIQKVKDALGVA 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01382 743 Pfam START domain 268 490 IPR002913 GO:0008289
Gma09g01382 743 Gene3D - 43 129 - -
Gma09g01382 743 Pfam Homeodomain 56 111 IPR001356 GO:0003677
Gma09g01382 743 SUPERFAMILY Bet v1-like 510 712 - -
Gma09g01382 743 ProSiteProfiles START domain profile. 258 494 IPR002913 GO:0008289
Gma09g01382 743 CDD START_ArGLABRA2_like 262 489 - -
Gma09g01382 743 SMART HOX_1 55 117 IPR001356 GO:0003677
Gma09g01382 743 SUPERFAMILY Bet v1-like 260 491 - -
Gma09g01382 743 Coils Coil 107 134 - -
Gma09g01382 743 SUPERFAMILY Homeodomain-like 36 113 IPR009057 -
Gma09g01382 743 ProSitePatterns 'Homeobox' domain signature. 88 111 IPR017970 GO:0000981|GO:0006355
Gma09g01382 743 MobiDBLite consensus disorder prediction 1 63 - -
Gma09g01382 743 MobiDBLite consensus disorder prediction 19 33 - -
Gma09g01382 743 CDD homeodomain 60 113 IPR001356 GO:0003677
Gma09g01382 743 Gene3D - 267 478 IPR023393 -
Gma09g01382 743 ProSiteProfiles 'Homeobox' domain profile. 53 113 IPR001356 GO:0003677
Gma09g01382 743 SMART START_1 267 491 IPR002913 GO:0008289
Gma09g01382 743 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 6 741 - -
Gma09g01382 743 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 6 741 IPR042160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01382 Gma-Chr9 37336810 37342509 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01382 1 740 Homeobox Transcription Factor Family AT3G61150 53.403 0.0 785
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Gma09g01382 START 2.6e-46 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01382 K09338 - gmx:100820113 1402.5