Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01376 ATGGTGGCGGTGTTGATGGTGATGTTGCTGAAGAAACTGTCGTGGCTGATTGAGGCGTTTGGTGGACAAGCTCTTACCTTCGCGGGAGATGTTTCAAATGAGGCCGATGTGGAAGCTATGATTAGAACTGTAGTTGATGCTTGGGGAACTGTTGATGTATTGGTAAATAATGCAGTAATTACTCAAGATGGTTTGTTAATGAGAATGAAGAAATCACAATGGCAGGAAGTTATTAATCTGAATCTCACTAGTGTTTTTCTTTGCATGCAGGCAGCAGCAAAGATTATGACGATGAAAAAGAAGGGAAGGATAATCAATATTACATTAGTTATTGGTCAGGTTGCCAATGTTGGACAAGCCAATTATAGTGCTGCAAAGGCAGGGGTAATTGGCCTCACAAAAAGTGTTGCCAGGGAATATGCTAGCAGAAACATCACTAGAATGGGAGATTGTCTGAACTTTTTGGGCATGGAAGATCTCAAGCTCCTTGAGGAAGAAATGGACAAGGCCGCCAAGGTTGTTCGTGAGTGTAAGGTTGATGTAAGTGGGCAAGTCAAGCTTGCAGATTTTGGGTTGGCAAAGGTGACAAAATTTAATGATGTTAAATCAAGCAAAGGCTCTCCATATTGGATGGCCCCTAAGGTTGTTAACCTAAAGAACCAAGGTGGTTATAGGTTAGCAGTTGATATATGGAGCTTAGGGTGTATAGTTTTGGAGATGTTGACAAGGCAGCCTCCTTATTCTGATTTGGAAGGACAGAAAAACGATGCAATCTTTGAGGGACAACTACTAGATTTGGATAAATTATGGCAAAAGATCTCATTCTCCATGTGGTCTTGGTTGAAGGCTTACCAAACTGACTTTGCTATTTCATTTCAGCAGTGGCAGATCAACCTGACAACATCTCTGTTGAGTTTTGTTTAG 924 0.4134 MVAVLMVMLLKKLSWLIEAFGGQALTFAGDVSNEADVEAMIRTVVDAWGTVDVLVNNAVITQDGLLMRMKKSQWQEVINLNLTSVFLCMQAAAKIMTMKKKGRIINITLVIGQVANVGQANYSAAKAGVIGLTKSVAREYASRNITRMGDCLNFLGMEDLKLLEEEMDKAAKVVRECKVDVSGQVKLADFGLAKVTKFNDVKSSKGSPYWMAPKVVNLKNQGGYRLAVDIWSLGCIVLEMLTRQPPYSDLEGQKNDAIFEGQLLDLDKLWQKISFSMWSWLKAYQTDFAISFQQWQINLTTSLLSFV 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01376 307 PANTHER SHORT-CHAIN DEHYDROGENASES/REDUCTASES FAMILY MEMBER 14 168 - -
Gma09g01376 307 Pfam Protein kinase domain 181 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01376 307 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 122 141 IPR002347 -
Gma09g01376 307 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 49 60 IPR002347 -
Gma09g01376 307 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 102 110 IPR002347 -
Gma09g01376 307 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 12 149 IPR036291 -
Gma09g01376 307 SMART serkin_6 48 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01376 307 SUPERFAMILY Protein kinase-like (PK-like) 180 254 IPR011009 -
Gma09g01376 307 PANTHER 3-OXOACYL-[ACYL-CARRIER-PROTEIN] REDUCTASE 4-LIKE 14 168 - -
Gma09g01376 307 Gene3D Transferase(Phosphotransferase) domain 1 179 287 - -
Gma09g01376 307 Coils Coil 160 180 - -
Gma09g01376 307 ProSiteProfiles Protein kinase domain profile. 1 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01376 307 Gene3D - 4 178 - -
Gma09g01376 307 Pfam short chain dehydrogenase 13 146 IPR002347 -
Gma09g01376 307 PRINTS Glucose/ribitol dehydrogenase family signature 96 112 IPR002347 -
Gma09g01376 307 PRINTS Glucose/ribitol dehydrogenase family signature 49 60 IPR002347 -
Gma09g01376 307 PRINTS Glucose/ribitol dehydrogenase family signature 122 141 IPR002347 -
Gma09g01376 307 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 109 137 IPR020904 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01376 Gma-Chr9 37143536 37152159 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01376 17 169 Acyl Lipid Metabolism Gene Families AT1G24360 60.131 9.84e-59 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gma09g01376 adh_short 5e-37 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01376 K00059 - gmx:100811718 236.498