Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01353 ATGCTTGAATTGAGTGAATCCCACTCCAAAAACTTGCACTTTCCCCTCACTCACATCATTCTCTTCTTCACATGTTTCAAACTTTCTAAAGCACAATCCTCCATGGAGCCAGTTCCCACCTACATCACCCACCACAGCTGGGAGCCTTCCGTCGCCATCACCGTCGGCGCCATCATCATCGCCCTCCTCTTAATGGGAATCATCTCAATCTACCTTCGCCGCTGCGCCGAGTCTCACATCATCATCACCACAACCCAAACCACCACCACCCTACCGTGCTCCTGCGCGCAGGGGATCAACAGGGAGCTCCTCAACACGTTCCCAACGCTCTTCTACTCCAACATCAAGGATCTCAAGAAGGGGAACGAAACGCTCGAATGCGCGGTTTGTTTAACAGATTTCACTGACAAAGACGCGCTTAGGCTGCTCCCCAAATGCAATCACGTGTTCCACCCTCACTGCATTGATTCCTGGCTCGCGTGTCACGTGACATGCCCGGTTTGTCGCGCGAATCTCAGCCAGGAATCCTCCCATGTTTCCATAACCGTCCCTCCTCATAACGAGGAAGAGGGTTCCAGAAACACAACAACAAACGAAGCTACCCAAATTGAGCAAAGTACAAGCAATGACGTTGGTCAAGTTTGTCTTGGAGATCCTACACCGACCAGTGATGCGGCTAAAATAATGTATATAAGTGAAGAGCAGCAACAGCAACACTCGTCTTCCGAGCCGACTTTTGAAGTTGAGTTAGACCCAAACACAAATTCTACTACTACTACTATTAACAATAATGGTGGCGATGGGGTTGTTGTTGTGTCCGAGAGGAACCTTTCGAGGTCGAACTCGACGGGGCATTGCATTGTGGAGGAGCAAGGGAAGGGTGTGGAGAGGTACACGTTGAGGTTGCCCGAAGATGTGAGGAGGTACATTCTGGTGAACCATGGGAGGAGTGTTCAACGTTCCGCGAGTGTTAAGGGGGTGTGTTGGAGTGATAGTGAAGAGAGTTATAAGGGAAAGAGGGTCAATGGAGAGGTGAGGGTGGAGAAGAGGTGGGTGATCTGCACACCACCATTTGTGGGACATGGCTGA 1089 0.5051 MLELSESHSKNLHFPLTHIILFFTCFKLSKAQSSMEPVPTYITHHSWEPSVAITVGAIIIALLLMGIISIYLRRCAESHIIITTTQTTTTLPCSCAQGINRELLNTFPTLFYSNIKDLKKGNETLECAVCLTDFTDKDALRLLPKCNHVFHPHCIDSWLACHVTCPVCRANLSQESSHVSITVPPHNEEEGSRNTTTNEATQIEQSTSNDVGQVCLGDPTPTSDAAKIMYISEEQQQQHSSSEPTFEVELDPNTNSTTTTINNNGGDGVVVVSERNLSRSNSTGHCIVEEQGKGVERYTLRLPEDVRRYILVNHGRSVQRSASVKGVCWSDSEESYKGKRVNGEVRVEKRWVICTPPFVGHG 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01353 362 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 100 179 IPR013083 -
Gma09g01353 362 SMART ring_2 127 168 IPR001841 -
Gma09g01353 362 Pfam Ring finger domain 126 169 IPR001841 -
Gma09g01353 362 ProSiteProfiles Zinc finger RING-type profile. 127 169 IPR001841 -
Gma09g01353 362 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 333 - -
Gma09g01353 362 PANTHER RING FINGER DOMAIN-CONTAINING 1 333 - -
Gma09g01353 362 MobiDBLite consensus disorder prediction 236 257 - -
Gma09g01353 362 MobiDBLite consensus disorder prediction 181 215 - -
Gma09g01353 362 CDD RING-H2_EL5_like 126 169 - -
Gma09g01353 362 SUPERFAMILY RING/U-box 110 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01353 Gma-Chr9 36486187 36487960 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01353 19 359 Rapid Response to Elicitors AT3G05200 31.304 1.33e-48 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01353 K10664 - gmx:100782532 701.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01599 16 36821636 36823065 Gma09g01353 09 36486187 36487960 GST