LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma09g01321	ATGGAGTTCTCATCAGCAGTTGCCTTCATCTTTTCTATTTTACCTCTTCTTTTGCTCTTGAAACTAACGTTTTCTTGGTGGGTTTCACCAATCCTGAACCATCTTAAGCTTAAAAGATGTGGGTTTGGAGGGCCACTCCCAAGTTTTCCTCTTGGAAACATTCAAGAGATGAAAAAGAAGAATAGCCTGAGTTCTTCATTAGGGTCCTCTAATCTCACCCATGATATACACTCCACTGTCTTCCCCTATTTTTCTCGCTGGCAAAACTCTCACGGGAAGGTGTTTATCTATTGGCTTGGTACAGAACCGTTTTTGTACATTGCAGATCCAGAATTCTTGAAAAAAATGTCCACTGAGGTCTTGGCCAAGAGATGGGGAAAACCTAGAGTGTTTAGACACGATAGAGATCCTATGTTTGGAAATGGTTTGGTTATGGTTGAAGGCAATGAATGGGTTAGTCACCGACATGTTATAGCACCAGCATTTTCTCCTCTTAATTTGAAGGCAATGGCAAGCATGATGACAGAGTCTACAAATCAAATGATAGATAGGTGGATTGCACAAATCAACTCCGGCAACCCCAAAATCGATGTCGAAAGAGAGGTTGTAGAAACGGCCGGAGAAATCATTGCAAAAACAAGCTTTGGCATGAAGGGAAAAAATGCAAAGGAAGTGTCTGAAAAACTACGTGCCCTACAAATGACACTTTTTAAGACAACAAGATATGTAGGTGTTCCATTTGGCAAGTGTTTCAACGTCAAGAAAACCCTAGAGGCCAAGAAGCTTGGGAAAGAGATTGACAAGCTATTGTTATCCGTCATAACATCTCGTATGAAATCAATCAAAAGGCAAACTCAAGAAGACTTGTTGGGATTGTTGTTGCAAGGAAACAATAATCATCAAGATGATGGCAAGTTAGGGAAGACATTCACCACTAGAGACTTGTTGGATGAGTGCAAGACTTTCTTCTTTGCTGGCCATGAAACAACGGCATTGGCTATCTCATGGACGTTGTTTCTTCTAGCTATGCATGAAGATTGGCAAATCCAGTTAAGAGATGAGATAAGAGAAGTGGTCGGTGATAAAGAACTTGATATCAACACGCTTGCGGGGCTTAGAAAGATGAAGTGGGTGATGAATGAAGTTCTAAGACTCTACCCAACGGCACCAAATGTTCAAAGGCAAGCAAGAGAAGACATTCAAGTTGATAACTTAACAGTGCCTAATGGGACCAACATGTGGATCGATGTTGTGGCCATGCATCATGACCCGGCATTGTGGGGAAAAGATGTCAACGAGTTTAGACCAGAGAGGTTCATGAATGATGTCAATGGTGGATGTAACCACAAAATGGGGTACTTGCCTTTTGGTTTTGGAGGGAGAATGTGTGTTGGTAGGAACTTGAGCTTTATGGAGTATAAGATAGTTCTAACCCTACTCCTCTCTAGGTTTAGTTTCAAAGTTTCACCAGGTTATAACCATGCACCCTCTATCATGCTATCCCTTAGGCCCACTTATGGACTTCTTCTCATAGTTCAACCCCTTTAG	1548	0.4167	MEFSSAVAFIFSILPLLLLLKLTFSWWVSPILNHLKLKRCGFGGPLPSFPLGNIQEMKKKNSLSSSLGSSNLTHDIHSTVFPYFSRWQNSHGKVFIYWLGTEPFLYIADPEFLKKMSTEVLAKRWGKPRVFRHDRDPMFGNGLVMVEGNEWVSHRHVIAPAFSPLNLKAMASMMTESTNQMIDRWIAQINSGNPKIDVEREVVETAGEIIAKTSFGMKGKNAKEVSEKLRALQMTLFKTTRYVGVPFGKCFNVKKTLEAKKLGKEIDKLLLSVITSRMKSIKRQTQEDLLGLLLQGNNNHQDDGKLGKTFTTRDLLDECKTFFFAGHETTALAISWTLFLLAMHEDWQIQLRDEIREVVGDKELDINTLAGLRKMKWVMNEVLRLYPTAPNVQRQAREDIQVDNLTVPNGTNMWIDVVAMHHDPALWGKDVNEFRPERFMNDVNGGCNHKMGYLPFGFGGRMCVGRNLSFMEYKIVLTLLLSRFSFKVSPGYNHAPSIMLSLRPTYGLLLIVQPL	515

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Gma09g01321	515	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	456	465	IPR017972	GO:0005506\|GO:0016705
Gma09g01321	515	PRINTS	P450 superfamily signature	325	342	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Gma09g01321	515	PRINTS	P450 superfamily signature	377	388	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Gma09g01321	515	PRINTS	P450 superfamily signature	454	463	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Gma09g01321	515	PRINTS	P450 superfamily signature	463	474	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Gma09g01321	515	PRINTS	E-class P450 group I signature	88	107	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Gma09g01321	515	PRINTS	E-class P450 group I signature	314	331	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Gma09g01321	515	PRINTS	E-class P450 group I signature	334	360	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Gma09g01321	515	PRINTS	E-class P450 group I signature	376	394	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Gma09g01321	515	PRINTS	E-class P450 group I signature	417	441	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma09g01321	Gma-Chr9	35615197	35618776	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma09g01321	10	515	Cytochrome P450	AT5G52400	59.180	0.0	647

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma09g01321	-		-	gmx:100784128	1010.36

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Event-related genes

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Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
Gma16g01573	16	36168222	36171958	Gma09g01321	09	35615197	35618776	GST
Gma09g01321	09	35615197	35618776	Gma10g02226	10	49825316	49828691	PCT
Gma09g01321	09	35615197	35618776	Gma20g01494	20	42054556	42057612	PCT
Gma10g02227	10	49843078	49845329	Gma09g01321	09	35615197	35618776	PCT
Gma20g01493	20	42042518	42044992	Gma09g01321	09	35615197	35618776	PCT

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