Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01293 ATGCCTTCATGGTGGGGGAAATCATCGTCAACCAAGAAGAAAGCAAATAAGGAAAGTTTTATCAATGCATTTCACCGAAAATTTAAAATCCCATCCGAAGGTAAACCAAACAGTAGATCCGGAGGATCTCGTAGACATAGCAATGACTCAATTTCGGAGAAAGGGGCTCAGTCTCCTCCTGAATCAAGATCTCCTTCGCCTTCCAAAGTGGGAAGGTGTCAAAGCTTTGTTGATAGGCCTCATGCCCAGCCACTACCACTTCCTGGCCTGCACCCATCAAATATAAGCCGAGCAGATTCTGAAATTAGTATACCATCATCTAGAGCAAGACATGAAAAGGGCTCCAAACCATCATTGTTTCTTCCACTACCAAAACCGGTGTGCATCCGTGGTAGGTTGAACCCTGCTGATTTGGATGGAGATTTGGTCACTGCTTCAGTCTCTAGTGAGAGCTCTGCTGATAGTGATGAACCAGTGGACTCTCGCAATCGTAGTCCTTTGGCAACTGACTGTGAAACTGGGACTAGAACTGCTGCAGGCAGTCCCTCCAGCTTGATGGTCAAGGATCAATCAACTACTGTTTCCCAAATAAACTCAAGGGAAGCTAAAAAACCGGCAAACATTCTTGGTAATCATACGTCTTCTACTTCACCAAAACGTAGGCCCTTAAGCAACCATGTTACGAATCTGCAGATTCCTCCTCATGGTGCCTTCTGCAGTGCACCTGACAGTTCAAGATCAAGTCCATCAAGAAGTCCATTGAGATCATTTGGCACAGAACAGGTGTTGAACTCTGCTTTTTGGGCCGGAAAGCCATATCCAGAGGTCAATTTTGGTGGATCTGGCCACTGCTCAAGTCCTGGTTCTGGTCACAATTCTGGGCATAATTCAATGGGAGGGGACATGTCAGGGCAGTTATTTTGGCAACCTAGCAGGGGTAGCCCAGAGTATTCCCCCGTACCTAGTCCCAGAATGACTAGCCCAGGTCCAAGCTCTAGAATTCAGAGTGGAGCTGTTACACCTATTCATCCAAGAGCTGGGGGAACACCCAATGAATCACAAACAGGAAGGGTTGATGATGTAAAACCACAGAGTCATCGTTTACCCCTTCCTCCCTTAGCAGTTACCAATACTTTGCCTTTCTCTCATTCAAATTCTGCAGCAACTTCTCCATCTATGCCAAGAAGTCCTGGAAGAGCAGATAATCCAATTAGCCCTGGATCACGTTGGAAAAAAGGAAAGCTGCTTGGCAGAGGCACATTTGGACATGTCTATGTTGGCTTTAATAAGGAAAGTGGTGAAATGTGTGCTATGAAAGAGGTAACTCTGTTTTCAGATGATGCCAAATCTAAAGAAAGTGCTAAGCAATTAATGCAGGAAATTACCTTGTTGAGCCGGTTACGACATCCAAATATAGTGCAGTATTATGGTTCCGAAACAGTAGGCGACAAGCTTTACATATATCTGGAGTATGTTGCTGGAGGCTCCATATATAAACTTCTTCAAGAATATGGACAATTTGGTGAACTAGCTATTCGTAGTTTTACTCAACAAATTTTGTCAGGACTTGCTTATTTACATGCTAAAAATACTGTCCACAGGGACATCAAAGGAGCAAATATACTGGTAGATACTAATGGCCGGGTTAAGTTGGCAGACTTTGGCATGGCAAAGCATATAACAGGGCAATCATGTCCATTATCATTCAAGGGAAGCCCCTATTGGATGGCTCCTGAGGTTGTTATAAAAAACTCTAATGGTTGCAACCTAGCTGTTGATATATGGAGCCTTGGATGCACAGTTTTGGAAATGGCTACAACTAAACCTCCTTGGAGTCAGTATGAAGGGGTTGCTGCCATGTTCAAGATTGGTAATAGCAAGGAACTCCCAACAATCCCAGATCATCTCTCTTGTGAAGGAAAGGATTTTGTTAGGAAATGCCTACAACGTAATCCACACAATCGCCCTTCAGCCAGTGAATTATTGGACCACCCTTTTGTAAAATATGCTGCACCTTTAGAAAGACCTATTCTGGGTCCTGAGTCTCCTTCAGACCCAGCAGTATCAGGGATCACACAAGGAGCTACAACTTCGGGCATTGGACAAGGAAGGAATCCATCTAAGTTGGATTCAGATCGACTTTCTCTTCATTCTTCTAGGTTTTTGAAAACTAATCCTCATGCAAGTGAAATCCATATTCCAAGGAATATATCTTGCCCTGTCTCACCCATTGGAAGCCCACTTTTGAGGCCAAGATCGCCACAACACATGAATGGGCGAATGTCTCCCTCCCCTATATCTAGCCCTCGGACTGCTTCTGGTGCATCCACACCTCTCAATGGTGGTAGTGGTGCCATTCCATTTAGTAATCACTTAGTTTACATTCAAGAGGGTCTTGGAAGCTTGCCAAAGTCTTCAAATGGTGTCTACGTTAGTGTCCCTGCTGCTCATCATGACTTGAATATTGACATTTTTCGAGGAATGCAACAGACATCTCACATTACATCAGAACTGGTTCCAAGTGAAAGTGATGTTTTGGGGAAGCAGTTTGCACGGTCTCCTCATAATGAGCCGTATGATGTTCAATCAGTCTTGGCTGACCGTGTTTGCCGGCAGCTGCTGGGGGATAATGTGAAAATTAACCCATCCCTTGATCTAAGTCCCAACTCTTTGCTCAGCCGGGCTAATGGTTTATGA 2697 0.4442 MPSWWGKSSSTKKKANKESFINAFHRKFKIPSEGKPNSRSGGSRRHSNDSISEKGAQSPPESRSPSPSKVGRCQSFVDRPHAQPLPLPGLHPSNISRADSEISIPSSRARHEKGSKPSLFLPLPKPVCIRGRLNPADLDGDLVTASVSSESSADSDEPVDSRNRSPLATDCETGTRTAAGSPSSLMVKDQSTTVSQINSREAKKPANILGNHTSSTSPKRRPLSNHVTNLQIPPHGAFCSAPDSSRSSPSRSPLRSFGTEQVLNSAFWAGKPYPEVNFGGSGHCSSPGSGHNSGHNSMGGDMSGQLFWQPSRGSPEYSPVPSPRMTSPGPSSRIQSGAVTPIHPRAGGTPNESQTGRVDDVKPQSHRLPLPPLAVTNTLPFSHSNSAATSPSMPRSPGRADNPISPGSRWKKGKLLGRGTFGHVYVGFNKESGEMCAMKEVTLFSDDAKSKESAKQLMQEITLLSRLRHPNIVQYYGSETVGDKLYIYLEYVAGGSIYKLLQEYGQFGELAIRSFTQQILSGLAYLHAKNTVHRDIKGANILVDTNGRVKLADFGMAKHITGQSCPLSFKGSPYWMAPEVVIKNSNGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDHLSCEGKDFVRKCLQRNPHNRPSASELLDHPFVKYAAPLERPILGPESPSDPAVSGITQGATTSGIGQGRNPSKLDSDRLSLHSSRFLKTNPHASEIHIPRNISCPVSPIGSPLLRPRSPQHMNGRMSPSPISSPRTASGASTPLNGGSGAIPFSNHLVYIQEGLGSLPKSSNGVYVSVPAAHHDLNIDIFRGMQQTSHITSELVPSESDVLGKQFARSPHNEPYDVQSVLADRVCRQLLGDNVKINPSLDLSPNSLLSRANGL 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01293 898 SUPERFAMILY Protein kinase-like (PK-like) 401 668 IPR011009 -
Gma09g01293 898 Gene3D Transferase(Phosphotransferase) domain 1 408 678 - -
Gma09g01293 898 MobiDBLite consensus disorder prediction 385 411 - -
Gma09g01293 898 MobiDBLite consensus disorder prediction 166 223 - -
Gma09g01293 898 Pfam Protein kinase domain 411 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01293 898 SMART serkin_6 410 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01293 898 ProSitePatterns Protein kinases ATP-binding region signature. 416 439 IPR017441 GO:0005524
Gma09g01293 898 MobiDBLite consensus disorder prediction 312 366 - -
Gma09g01293 898 MobiDBLite consensus disorder prediction 52 71 - -
Gma09g01293 898 ProSiteProfiles Protein kinase domain profile. 410 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01293 898 MobiDBLite consensus disorder prediction 755 777 - -
Gma09g01293 898 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 1 814 - -
Gma09g01293 898 MobiDBLite consensus disorder prediction 757 777 - -
Gma09g01293 898 CDD STKc_MEKK1_plant 409 667 - -
Gma09g01293 898 MobiDBLite consensus disorder prediction 11 51 - -
Gma09g01293 898 MobiDBLite consensus disorder prediction 1 124 - -
Gma09g01293 898 MobiDBLite consensus disorder prediction 144 223 - -
Gma09g01293 898 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 814 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01293 Gma-Chr9 35163708 35169240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01293 1 888 MAP Kinase Kinase Kinase AT1G63700 59.641 0.0 878
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gma09g01293 Pkinase 6.7e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01293 K20717 - gmx:100819762 1710.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01559 16 35995374 36003057 Gma09g01293 09 35163708 35169240 GST
Gma09g01293 09 35163708 35169240 Gma10g02210 10 49666330 49672454 PCT
Gma20g01511 20 42179336 42187183 Gma09g01293 09 35163708 35169240 PCT