Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01274 ATGTCATCGCCGGGGTTCCCTGGCGGCGGTAGTGCGTCTGAGTTTTTCGCTGGAGCGGGTGTTTTCGGCGGCAGATCCATTCCGGGGGCCACCATGAACAACCCCAACGCCGCCGCTTCCGCCACCATCAACAACCTCCACCCTCTCTACCGAACCCAACAACAACAGAACCTTCCCGCAATGTTTCTAGATCCTTCCTCGCAGATCGCCCAACGCCAAACACCAACCTTCATCGGTAAGCGCACCCTAACCGAATTCCAAGCCTACAACCAAACCAACAACAACCCCAACCACGTCCTCTCGAACCTCCTGCTTCGTTCCGTTAAGCCCCGGACCAGTTTATACCACACCTCTATGGACTTTCCTGTTCCCGAATTGCAAAACCAAAACCTTTATTCCAACCAAACGCAGCGTTTTGGTGTTCCGTTACTTCACCAGCTTCGTCCTCAGCCCATTAATCTCCCCAACAACGGGCCCGTGCCCATGACAGGCCCAAATTTCGGTTACCGGAACTCGAATTTGGGCTTACCACAGAACCAGAACCGGGTTCGTGTTTCTCTCCCTGTTTCTGTTCCGGTTCAGGTTCACTCATCTGAACCGGAAAAGAAGATCATGGACCACAGGCTTCTGGAATTGGAGAAGCAGCTTCTGGAAGATAACGACGACGAAGGAGAAGCTGATGCTGCGTCTGTGATAACCACGAGCGAGTGGTCCGAGACTTATCAGAATTTAATCAGTCCCAGTCCGGTTCAGAAACCGGTTTTGACGACGACGTCGCCGACTTCTTCCACGACGTCGTCCACGTCATCTTCTTCCTCCGTGGCTTCGCCTGCTTCCGGATGCTCCAAGCAAACGCTCATGGAAGCCGCATCTGCAATTGTTGAAGGTAAACACGATGTTGCGGCGGAGATCCTGAACCGGTTGAACGGTGTGAACCGGAGTGATAGGTTGACGGATTGCATGGTTTCGGCGTTGAAATCGAGGATGAATCCGGTGGAGTATCCTCCGCCGGTGGCGGAGCTTTTCAGGAAGGAGCACGCCGATTCGACTCAGATGCTCTTGGAGAACTCGGTGTGCTTCACGGTAGGGTTCATGGCGGCGAATCTCGCGATTCTGGAAGCCGCATTTGAGGAGAAAACGGAGACGAGCAGGTTCTGCGTGGTGGATTTTGAGATTGGACAAGGGAAGCAGTATTTGCACCTCCTCAACGCGCTCTCGGCGCGTGGACAGAACGTGGCGGTGAAGATCGCAGCCGTAGCAGAAAAAGGAGGTGAGGAGAGAGTGCGGGCTGTGGGAGACATGCTGAGATTACTCGCGGAGAGGCTGAGGATCCGGTTCGAGTTCAAAATCGTCGCGACTCAGAAAATCGCCGAGTTGACTCGTGAGTCGCTGGGATGCGATGCGGACGATGTTCTCATGGTGAACTTCGCGTTCAAGCTGAACAAGATTCCGGACGAGAGCGTCTCCCCGGAAAACCCTCGGGACGAGCTTCTTCGGCGCGTGAAGAGACTCGCGCCGCGCGTGGTGACGGTTGTGGAGCAGGAGATAAACGGGAACACGGCGCCGTTTTTGGCGCGCGTGGCGGAAACGCTGTCGTATTACGGCGCGTTGTTGGAGTCCATTGAGGCCACCACGGTGGGGAAAGATAACAGCATTAACAACTCAGACCGAGTCAGACTCGAGGAGGGACTGAGTCGAAAATTGCATAACTCGGTGGCGTGCGAAGGAAGAGATCGCGTGGAACGGTGCGAAGTGTTTGGAAAATGGCGCGCGCGTATGAGCATGGCGGGGTTTGAGTTAAAACCACTGAGTCAAAGCATGGTCGAGTCAATTAAAGCGCGACTCATCTCTGCCAACAACCGAGTCAACTCGGGACTCACCGTAAAAGAAGAGAACGGAGGGATTTGCTTTGGTTGGATGGGAAGAACACTCACAGTCGCATCTGCTTGGCGTTAA 1956 0.545 MSSPGFPGGGSASEFFAGAGVFGGRSIPGATMNNPNAAASATINNLHPLYRTQQQQNLPAMFLDPSSQIAQRQTPTFIGKRTLTEFQAYNQTNNNPNHVLSNLLLRSVKPRTSLYHTSMDFPVPELQNQNLYSNQTQRFGVPLLHQLRPQPINLPNNGPVPMTGPNFGYRNSNLGLPQNQNRVRVSLPVSVPVQVHSSEPEKKIMDHRLLELEKQLLEDNDDEGEADAASVITTSEWSETYQNLISPSPVQKPVLTTTSPTSSTTSSTSSSSSVASPASGCSKQTLMEAASAIVEGKHDVAAEILNRLNGVNRSDRLTDCMVSALKSRMNPVEYPPPVAELFRKEHADSTQMLLENSVCFTVGFMAANLAILEAAFEEKTETSRFCVVDFEIGQGKQYLHLLNALSARGQNVAVKIAAVAEKGGEERVRAVGDMLRLLAERLRIRFEFKIVATQKIAELTRESLGCDADDVLMVNFAFKLNKIPDESVSPENPRDELLRRVKRLAPRVVTVVEQEINGNTAPFLARVAETLSYYGALLESIEATTVGKDNSINNSDRVRLEEGLSRKLHNSVACEGRDRVERCEVFGKWRARMSMAGFELKPLSQSMVESIKARLISANNRVNSGLTVKEENGGICFGWMGRTLTVASAWR 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01274 651 Pfam GRAS domain family 283 651 IPR005202 -
Gma09g01274 651 PANTHER SCARECROW-LIKE PROTEIN 8 72 650 IPR030013 -
Gma09g01274 651 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 72 650 IPR005202 -
Gma09g01274 651 ProSiteProfiles GRAS family profile. 273 651 IPR005202 -
Gma09g01274 651 MobiDBLite consensus disorder prediction 244 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01274 Gma-Chr9 34661290 34663837 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01274 44 651 GRAS Transcription Factor Family AT5G52510 47.014 3.25e-154 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma09g01274 GRAS 2e-84 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01274 - - gmx:100808172 1207.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01550 16 35838827 35841194 Gma09g01274 09 34661290 34663837 GST
Gma09g01274 09 34661290 34663837 Gma10g02203 10 49597538 49599310 PCT
Gma09g01274 09 34661290 34663837 Gma20g01518 20 42226137 42228391 PCT
Gma10g02203 10 49597538 49599310 Gma09g01274 09 34661290 34663837 PCT
Gma20g01518 20 42226137 42228391 Gma09g01274 09 34661290 34663837 PCT