Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01261 ATGGCGGCAGGACTCTCCGCCGCCATAACCATGAAACCCCTCCTCCGTTTCCACCAACCTCGCCTCCCCAAACCAATCCCAACAACACTCCCTTTCTCTCCCTTGAGAATTTTCCATCACACAGCATCACCGATACCCCAAAATTTTTCAACTTTCACCGTTTGTGTCCTCATGCAGGACCCAAAACAAGGCACCCAGATGGAAATTCAGGCACAAGAACCACCACCCTCTCCTCCTCAGCAAGTTTTGTCACAAAAGTTGGCTGAGAAATTGGCCAGAAAAGAGTCTGAGAGCTTCACTTACCTCATTGCTGCTGTCATGTCTAGCTTCGGCATCACATCCATGGCAGTGTTCGCTGTTTATTATAGATTTGCATGGCAAATGGAGGGTGGAGAAGTGCCTTTGTCTGAAATTTTTGGCACATTTGCTCTATCAGTGGGAGCTGCTGTGGGTATGGAGTTTTGGGCTAGATGGGCTCACAGGGCTCTATGGCATGCTTCCCTGTGGCACATGCATGAGTCCCATCATCGACCAAGAGAAGGGCCCTTCGAGCTTAACGATGTATTTGCAATAATCAACGCTGTCCCTGCCATCGCTCTCCTTTCCTATGGTTTCTTTAACAAGGGACTGGTCCCTGGGCTTTGTTTTGGTGCGGGTCTTGGAATTACTGTCTTTGGGATGGCCTACATGTTTGTACACGATGGATTGGTTCACAAGAGATTCCCGGTGGGCCCCATAGCCAACGTGCCCTATCTCAGAAGGGTGGCCTCTGCTCACCAACTTCACCATTCGGAAAAATTCGATGGAGTGCCTTATGGGCTGTTTATGGGACCAAAGGAAGTTGAAGAGGTGGGGGGGCTAGAAGAGCTGGAGAAAGAGATAAGTAGGAGAGCAAGATCATACAAAATAGCTAGAGAGAAAAGCTAA 927 0.4908 MAAGLSAAITMKPLLRFHQPRLPKPIPTTLPFSPLRIFHHTASPIPQNFSTFTVCVLMQDPKQGTQMEIQAQEPPPSPPQQVLSQKLAEKLARKESESFTYLIAAVMSSFGITSMAVFAVYYRFAWQMEGGEVPLSEIFGTFALSVGAAVGMEFWARWAHRALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSYGFFNKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIANVPYLRRVASAHQLHHSEKFDGVPYGLFMGPKEVEEVGGLEELEKEISRRARSYKIAREKS 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01261 308 PANTHER BETA-CAROTENE HYDROXYLASE 2 301 - -
Gma09g01261 308 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 2 301 IPR045019 GO:0016491
Gma09g01261 308 Pfam Fatty acid hydroxylase 148 275 IPR006694 GO:0005506|GO:0008610|GO:0016491
Gma09g01261 308 Coils Coil 287 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01261 Gma-Chr9 34411572 34414253 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01261 1 218 Chloroplast and Mitochondria Gene Families AT4G25700 61.572 2.67e-92 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01261 K15746 - gmx:100813368 602.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01542 16 35769939 35772668 Gma09g01261 09 34411572 34414253 GST
Gma09g01261 09 34411572 34414253 Gma10g02197 10 49536197 49545595 PCT
Gma09g01261 09 34411572 34414253 Gma20g01523 20 42270346 42273998 PCT
Gma10g02197 10 49536197 49545595 Gma09g01261 09 34411572 34414253 PCT
Gma20g01523 20 42270346 42273998 Gma09g01261 09 34411572 34414253 PCT