Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01255 ATGGCCAAAGTAGTGATGACCAACGAAGAGTTATTTAACTTGGTTTTGCATGTTGAATGCCGCACCAGTGCACCTAACATTTGTTCTTACATAAATTTGCCATACGTTTCGCCACAAATCCCGCATTTAACTCTCTCTCTAAAATCTTTGAAAATGGTATCCAAAAACCCGAACCCGCCCGAGGGATTCTACTTGGATCCTAGTGGTGGCATGGCTCTTCCGGGGAAGCCTCCCTTCGCTTCCGTCTCCGCCGCTGCCGCCGCCGCGAACTCGTCGGAGGACGCCGCCAAGAAGATCCGCAAGCCCTACACCATCACAAAGTCAAGGGAGAACTGGACCGAACCCGAACACGACAAGTTCCTCGAAGCAATTCAACTGTTTGACCGTGACTGGAAAAAGATTGAAGCATTTGTTGGATCAAAGAGTGTTATACAGATACGTAGTCATGCACAGAAATACTTTCTAAAAGTTCAGAAGAGTGGGACAAGTGAACATCTTCCACCACCCAGGCCTAAAAGAAAAGCTGCCCATCCATATCCTCAAAAAGCTTCCAAAAATGCTCCTGTACTCTCACAAGTATCCGGACGTTTTCAGTCTTCATCTGCTTTGCTTGAACCTGGATACATCTCAAAGAATGATGCCCCACCAATGCTTAAAACTCCTATTATGAACACCGTGTCATCATCCTGGTCAAACAACACCTTGCAAACTGTCAATTTATCTCCTGTGAAAAAAGTGAATAATCCTTGTAGTAGCGGTGAAAGTACTCCTAAAGTGCGGCCGGTTGGTGAATCTAATGGTCAAGGGAATAAAATCCATCCATTGAGAGTTCTTCCAGATTTTACTGAGGTATACGGCTTCATTGGCAGTTTGTTTGACCCAAATGCAACTGAGCATCTGCAGAAACTAAAAAAGATGGACCGTATAGATGTTGAGACGGTGCTACTGTTAATGAGAAACCTGTCCATCAATTTAACTAGCCCAGATTTTGAGCATCATAGAAAGCTGCTTTCATCATATGAGGTTGAACCAGAGAGAGATAATAACTATCAACGCGGATAG 1062 0.4435 MAKVVMTNEELFNLVLHVECRTSAPNICSYINLPYVSPQIPHLTLSLKSLKMVSKNPNPPEGFYLDPSGGMALPGKPPFASVSAAAAAANSSEDAAKKIRKPYTITKSRENWTEPEHDKFLEAIQLFDRDWKKIEAFVGSKSVIQIRSHAQKYFLKVQKSGTSEHLPPPRPKRKAAHPYPQKASKNAPVLSQVSGRFQSSSALLEPGYISKNDAPPMLKTPIMNTVSSSWSNNTLQTVNLSPVKKVNNPCSSGESTPKVRPVGESNGQGNKIHPLRVLPDFTEVYGFIGSLFDPNATEHLQKLKKMDRIDVETVLLLMRNLSINLTSPDFEHHRKLLSSYEVEPERDNNYQRG 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01255 353 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 104 158 IPR017930 -
Gma09g01255 353 PANTHER PROTEIN REVEILLE 6 54 349 - -
Gma09g01255 353 Gene3D - 111 159 - -
Gma09g01255 353 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 107 156 IPR006447 GO:0003677
Gma09g01255 353 PANTHER SWI/SNF COMPLEX-RELATED 54 349 - -
Gma09g01255 353 Pfam Myb-like DNA-binding domain 109 154 IPR001005 -
Gma09g01255 353 SMART sant 108 156 IPR001005 -
Gma09g01255 353 CDD SANT 111 154 IPR001005 -
Gma09g01255 353 MobiDBLite consensus disorder prediction 243 271 - -
Gma09g01255 353 SUPERFAMILY Homeodomain-like 103 159 IPR009057 -
Gma09g01255 353 MobiDBLite consensus disorder prediction 159 191 - -
Gma09g01255 353 ProSiteProfiles Myb-like domain profile. 104 154 IPR001005 -
Gma09g01255 353 MobiDBLite consensus disorder prediction 243 263 - -
Gma09g01255 353 ProSiteProfiles SANT domain profile. 107 158 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01255 Gma-Chr9 34249456 34257360 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma09g01255 Myb_DNA-binding 5e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01255 - - gmx:778054 590.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01538 16 35741107 35748310 Gma09g01255 09 34249456 34257360 GST
Gma09g01255 09 34249456 34257360 Gma10g02193 10 49502266 49507519 PCT
Gma09g01255 09 34249456 34257360 Gma20g01526 20 42283599 42289582 PCT
Gma10g02193 10 49502266 49507519 Gma09g01255 09 34249456 34257360 PCT
Gma20g01526 20 42283599 42289582 Gma09g01255 09 34249456 34257360 PCT