Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01229 ATGACTCATGAGGATTGGGATCTCTTTGCCATCGTTAGAAGTTGCAAAGCTGCTACATTTACTGCCACCACAAACACAGAAACCCCACCCACCACTACCACCACCACCACCTCCAACACTACCTCTTGCTCGGGTTTGAGCCAAGAAAATGGCTCATTCTCTTTTCCCAATCTGGTGCAACCAACAACCAATGGGTTCCAAGAGCTTCAACACCAACAATTGTTAATAAACTTCAACCCCACCAACACCATTACTAGCACTAGCACTAGCACTAGTGGCCTTGGCATCAATCCCAATTCCACGTTTTCTGAAGTTGCGGGATTCATTGGACAACAGCAGATACAGCAAAGTCTCCACCACCATCTCGTTCCTGCTCCCACAAATCACACCTTCATTGGAACACCCTCCACTACTGGTTTTGACAGGTTCCAACAACAGCAACTCCAAACCCCAGAACAACAGCAACCACAGCAAAACCAACCACCCCTTCAAGCACCACAAACAAGTCACATCCTTTCACCAACCACACAACCACAAACACCCAGATCAAGAAAAAGAAAGAGCCAGCAGAAGAAAATGGTATGCCATGTAACCGCACAAAACCTCTCATCAGACTTGTGGGCATGGCGAAAATATGGACAAAAACCCATCAAAGGCTCTCCATATCCAAGGAACTATTACAGATGCAGTAGCTGCAAAGGATGCGCTGCGAGAAAGCAAGTAGAGCGAAGCACCAGCGAACCCAACACGTTCATCGTGACCTACACCGGCGACCACAAACACGCGAAACCCGTTCACCGGAACTCCCTCGCCGGCAACACCAGAACAAAACTATCCACCACCCGTTTACCCGAAACCCATGAAACCGTGTCTTGTGTAATAATAGAAAACGCATGCTCTTCAAACTCTGAGCTTTCTCCCATGTCGGTAAGGTCCGACACGCTGGAAAACGAGGCAACGCTCGTACCCGGCGAACCCGATTGCCCGGACACGGATATTGACCCTGAGGTGCCCTCTGAAGAAGACGAAGACGTTTTGATACCCAACACAGGTGCCATGTCAGACTCGATTTTCTTGGGGTTGACCAATTTTGACCGCGACGGCGTTTCCACGCTTTAA 1119 0.4906 MTHEDWDLFAIVRSCKAATFTATTNTETPPTTTTTTTSNTTSCSGLSQENGSFSFPNLVQPTTNGFQELQHQQLLINFNPTNTITSTSTSTSGLGINPNSTFSEVAGFIGQQQIQQSLHHHLVPAPTNHTFIGTPSTTGFDRFQQQQLQTPEQQQPQQNQPPLQAPQTSHILSPTTQPQTPRSRKRKSQQKKMVCHVTAQNLSSDLWAWRKYGQKPIKGSPYPRNYYRCSSCKGCAARKQVERSTSEPNTFIVTYTGDHKHAKPVHRNSLAGNTRTKLSTTRLPETHETVSCVIIENACSSNSELSPMSVRSDTLENEATLVPGEPDCPDTDIDPEVPSEEDEDVLIPNTGAMSDSIFLGLTNFDRDGVSTL 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01229 372 MobiDBLite consensus disorder prediction 23 47 - -
Gma09g01229 372 MobiDBLite consensus disorder prediction 320 339 - -
Gma09g01229 372 SMART WRKY_cls 203 263 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma09g01229 372 PANTHER WRKY TRANSCRIPTION FACTOR 27-RELATED 4 364 - -
Gma09g01229 372 ProSiteProfiles WRKY domain profile. 198 264 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma09g01229 372 SUPERFAMILY WRKY DNA-binding domain 197 264 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma09g01229 372 MobiDBLite consensus disorder prediction 125 183 - -
Gma09g01229 372 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 4 364 IPR044810 GO:0003700
Gma09g01229 372 MobiDBLite consensus disorder prediction 125 194 - -
Gma09g01229 372 Pfam WRKY DNA -binding domain 205 261 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma09g01229 372 Gene3D WRKY domain 186 257 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01229 Gma-Chr9 33848007 33849458 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01229 182 277 WRKY Transcription Factor Family AT5G52830 80.208 3.54e-52 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma09g01229 WRKY 6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01229 - K13425 gmx:100788213 643.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01529 16 35634549 35636080 Gma09g01229 09 33848007 33849458 GST
Gma09g01229 09 33848007 33849458 Gma10g02188 10 49465910 49467025 PCT
Gma09g01229 09 33848007 33849458 Gma20g01530 20 42322706 42324676 PCT
Gma10g02188 10 49465910 49467025 Gma09g01229 09 33848007 33849458 PCT
Gma20g01530 20 42322706 42324676 Gma09g01229 09 33848007 33849458 PCT