Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01226 ATGCACCACTTGGCGGGTCACCCCAATGTCATACAAATTGTTGGAGCTTATGAGGATGTTGTGGTTGTGCATGTTGTCATGGAGCTTTGTGCTGGAGGAGAGTTGTTTGATAGGATCATTCAAATAGGGCATTACACTGAGAGAAAGGCTGCTGAACTTGCTAGGTTGATTCTTAATGTTATGGAGGCCTATCATTCTCTTGGGGTCATGCATAGGGATTTGAAGCTTGAGAATTTTTTGTTTATTAATCACGAGGAGGAGTCACCTCTTAAGACCATTGATTTTGGACTCTTGTGTTCTTTAGACAAGGTATTGTATTTCCCTCCTTCTGGTTTAGTTAGTGATCCTTTGGTGTAA 357 0.4146 MHHLAGHPNVIQIVGAYEDVVVVHVVMELCAGGELFDRIIQIGHYTERKAAELARLILNVMEAYHSLGVMHRDLKLENFLFINHEEESPLKTIDFGLLCSLDKVLYFPPSGLVSDPLV 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01226 118 ProSitePatterns Serine/Threonine protein kinases active-site signature. 69 81 IPR008271 GO:0004672|GO:0006468
Gma09g01226 118 ProSiteProfiles Protein kinase domain profile. 1 118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01226 118 SMART serkin_6 1 118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01226 118 Gene3D Phosphorylase Kinase; domain 1 12 29 - -
Gma09g01226 118 SUPERFAMILY Protein kinase-like (PK-like) 1 104 IPR011009 -
Gma09g01226 118 Gene3D Transferase(Phosphotransferase) domain 1 1 98 - -
Gma09g01226 118 Pfam Protein kinase domain 2 102 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01226 118 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 97 - -
Gma09g01226 118 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 2 1 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01226 Gma-Chr9 33790712 33791068 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01226 1 115 EF-hand Containing Proteins AT2G38910 71.304 3.06e-53 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gma09g01226 Pkinase 2.1e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01226 K13412 - gmx:100813232 170.629