Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01223 ATGGCTTCCGATCTCGAAGCAAAAGCCAAAGAGGCCTTCGTCGAAGACCACTTCGAACTCGCCGTGGACCTTCTCTCTCAGGCCATTCATCTCGAACCCAACAAAGCCGAATTCTACGCCGACCGCGCCCAAGCCAACATCAAACTCAACAACTTCACTGAGGCTGTGGCTGATGCTAACAAAGCAATTGAATTGAATCCTTCTCTACCAAAAGCATATTTGCGGAAAGGTACTGCTTGCATGAAGCTTGAGGAATATGAAACTGCAAAGGCTGCTCTGGAGGTGGGTGCATCATTGTCTCCAGACAACTCAAGGTTTGCTACTTTGATCAAAGAATGTGATAAGCTCATTGCAGAAGAATCTTATACCCCACCTATTATAGAGGAAAAGGCCACAACAGAAGATGTTACTCCAAAAGATGTTCAGCAACAAGATGATCTTCTAGAGAAGCCAACAGTTACAGTGACTAAACCTAAATATAGGCATGAATTCTACCAGAAACATGATCAGGTGGTTGTGACCATATTTGCAAAGAAAATCCCAAAGGAAAGCATTACTGTTGACTTCGGTGAACAAATACTAAGTGTTAGTATTAATGTCACAGGAGAAGACACATATGTTTTTCAACCTCGCTTATTTGGAAAGATCATACCTTCCAATTGTCAATATGAAGTTTTGTCCACCAAAATTGAAATTCGTCTTGCAAAAGCAGAACCTATTCACTGGACATCTCTAGAATTCACCAGAGACATCGTTGTTCAACAGAGGGTTAATGCTTCTTCAGTTACTGGAAGTCAAAGACCTTCTTACCCATCCTCAAAACAAACAAGAGATTGGGACAAGATTGAAGCTCAAGTCAAGAAAGAGGAGAAAGATGAAAAGCTTGATGGCGATGCTGCATTGAACAAATTTTTCCGCGAAATATATCAAGATGCAGATGAGGATACAAGAAGAGCAATGAAAAAGTCATTTGTTGAGTCTAATGGGACAGTTCTGTCTACAAACTGGAAAGAAGTGGGAACAAAGAAGGTAGAGGGAAGTCCTCCTGATGGCATGGAGTTGAAGAAATGGGAATATTAA 1080 0.413 MASDLEAKAKEAFVEDHFELAVDLLSQAIHLEPNKAEFYADRAQANIKLNNFTEAVADANKAIELNPSLPKAYLRKGTACMKLEEYETAKAALEVGASLSPDNSRFATLIKECDKLIAEESYTPPIIEEKATTEDVTPKDVQQQDDLLEKPTVTVTKPKYRHEFYQKHDQVVVTIFAKKIPKESITVDFGEQILSVSINVTGEDTYVFQPRLFGKIIPSNCQYEVLSTKIEIRLAKAEPIHWTSLEFTRDIVVQQRVNASSVTGSQRPSYPSSKQTRDWDKIEAQVKKEEKDEKLDGDAALNKFFREIYQDADEDTRRAMKKSFVESNGTVLSTNWKEVGTKKVEGSPPDGMELKKWEY 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01223 359 ProSiteProfiles TPR repeat profile. 36 69 IPR019734 GO:0005515
Gma09g01223 359 ProSiteProfiles CS domain profile. 157 246 IPR007052 -
Gma09g01223 359 CDD p23_CS_SGT1_like 163 246 - -
Gma09g01223 359 PANTHER PROTEIN SGT1 HOMOLOG 1 359 IPR044563 GO:0051087
Gma09g01223 359 SUPERFAMILY HSP20-like chaperones 145 252 IPR008978 -
Gma09g01223 359 Pfam Tetratricopeptide repeat 36 68 IPR019734 GO:0005515
Gma09g01223 359 Pfam Tetratricopeptide repeat 71 103 IPR019734 GO:0005515
Gma09g01223 359 Pfam SGS domain 277 357 IPR007699 -
Gma09g01223 359 Pfam CS domain 161 236 IPR007052 -
Gma09g01223 359 Gene3D - 158 248 IPR008978 -
Gma09g01223 359 SUPERFAMILY TPR-like 3 113 IPR011990 GO:0005515
Gma09g01223 359 Gene3D Tetratricopeptide repeat domain 1 150 IPR011990 GO:0005515
Gma09g01223 359 ProSiteProfiles TPR repeat profile. 70 103 IPR019734 GO:0005515
Gma09g01223 359 PANTHER PHOSPHATASE-RELATED 1 359 - -
Gma09g01223 359 ProSiteProfiles SGS domain profile. 269 359 IPR007699 -
Gma09g01223 359 Coils Coil 42 62 - -
Gma09g01223 359 SMART tpr_5 2 35 IPR019734 GO:0005515
Gma09g01223 359 SMART tpr_5 36 69 IPR019734 GO:0005515
Gma09g01223 359 SMART tpr_5 70 103 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01223 Gma-Chr9 33684044 33688207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01223 1 101 U-box Gene Family AT3G07370 28.571 3.77e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01223 K12795 - gmx:100194421 708.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01525 16 35547164 35551181 Gma09g01223 09 33684044 33688207 GST