Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01200 ATGTTTGTTTTCTCCATACCAACTGGTCATGAATTTTTCTTTTGCAGATTGTCATCACAGTATGCCTGGAAGTCCATTTCAAAGAGGAAGCTTGTGAGTAGATCCGACAAGGAGGACATGAAGAGGGGCATTCAAATCATGCTGCATTTGAGTGGAGAATCTAACATTGTGGAGTTCAAAGGTGCTTTTAAGGATAAGCAATCAGTTCATGTGGTTATGAAGCTGTGTGCTGGTGGTGAACTTTTTGACAGGATTATTGCCAAGGTCCACTATAGTGAAACAACTGTTGGTTCAATATGTAGGCAGGTTGTTAAGGTTGTTAACACCTGCCATTTTATGGGTGTCATTGATAGGGATCTCAAGCTAGAGAATTTCTTGCTATCTAGTAAGGATGGCGAGGGACTTCTCAAGGCCACACATTTTGGCTTACCAGTCTTCATTGAAGAAGTTGTAGCAGAATACTGGGATAATGATGTCGTGGTTGCTGTCATTTTGGGTATTGGAACCAATGCTTGCTATGTTGAATAG 528 0.411 MFVFSIPTGHEFFFCRLSSQYAWKSISKRKLVSRSDKEDMKRGIQIMLHLSGESNIVEFKGAFKDKQSVHVVMKLCAGGELFDRIIAKVHYSETTVGSICRQVVKVVNTCHFMGVIDRDLKLENFLLSSKDGEGLLKATHFGLPVFIEEVVAEYWDNDVVVAVILGIGTNACYVE 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01200 175 Gene3D Transferase(Phosphotransferase) domain 1 13 150 - -
Gma09g01200 175 SMART serkin_6 2 174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01200 175 PANTHER SERINE/THREONINE-PROTEIN KINASE 19 149 - -
Gma09g01200 175 Gene3D - 151 175 - -
Gma09g01200 175 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 21-RELATED 19 149 - -
Gma09g01200 175 SUPERFAMILY Protein kinase-like (PK-like) 18 148 IPR011009 -
Gma09g01200 175 Pfam Protein kinase domain 19 147 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01200 175 ProSiteProfiles Protein kinase domain profile. 1 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01200 Gma-Chr9 32819654 32820432 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01200 20 149 EF-hand Containing Proteins AT1G50700 70.000 9.90e-61 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gma09g01200 Pkinase 3.4e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01200 K13412 - gmx:100794568 218.009