Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01112 ATGACCAAATTGAAAAAGAAGCATCCTCTTCCTTCAGAAATCTTATTCTTTAAGATTATCTCTGAAGCAAGTCTTCAAGATGGAAAGCTTATTCCAAACAAGTTCACTAGGGAATATGGTGTTAATCTGTCAAACCCGGTGTTTCTCAAGCCTCCAGATGGTATAGAATGGAAAATTTTTTGGACTAAACATGATGGTGATATTTGGTTTCAAAAGGGTTGGAAGGAATTTGCTACATATTACTCCTTAAGTCACAAATATTTGGTGTTGTTTAAGTACCAAGAAACGTCTCATTTGGAGGTACACATATTTGACCAGAGTGCCCTTGAAGTAGATTATCCTTTCTGTGGCATTAAAATTGAACATGAAAACCTTGACCACGTTAGCAatgactctgttgaagtttcggatgactctattgaagttttggatgaGCTGACTCCAAGTCAGAAGAAGACTAGACTGAAATCAACATCATGTTCTCGACCACGTAAAAAATTGAACACAGGCCCAAGTGAAGTTTTTGAAGAAAGCTCCAATTTGCCTCAACATGTCCAAATTAAAGGTGAACAATCTCAAGGTACTAACCTTGGAATGTCATCTGACAAGCAAGTATTAGATGGTATGGCTCCTGAACAGCCTCCAGCTAAGAGACAGAAGAAGGATCAGTCTTCTTCTCAGTCTGCACACAGAACTGAGTACCCCACTAAGTTCAGGACTGTAACTCATGAGCAGAGGTACGAGACAGAAATCAAGATGAGAAACTTCATCCCAGAGAAAAACTTCAAGCTCAAGCCAGGAGAATATGATGAGATACAGAAAGTCATAACATGGCGAAAGTGGGAGAAGCTATGCTCCTTTGCACAGAACTTCCACCCTCAAATAGTTCGCGAGTTCTATGCGAATGCCTATGGCATTGAGGGTGATACAACTCCCCTGCACACCAGCTGGGTGAGAGGGAAGATGGTCTCCTATGAGGAGGAGACCATTAATTCTTTCTTTGGGACTCAAGCAGCTGCAGATTGTTCCTATAAGGCTGGAGGCGACCTAGTCAAGGACTATGGCGAGATGAAGAAACTTCTAGCTAGGCCAGGGGCCATCTGGATTGGCAAGAAAGTTAAACCGAGGTGTCTCCGGTCAATAGACTTGTATCCAGTGGTACATGCATGGAGCTCATGGATGCATCACACTGTGCTACCTTGTGCCAACGAGTCTAATGTAACTGTAGTGCGTAGTCAATTCCTGATTGCTACCATCTTGAATGAGCCTTTGGACATCGGTCGGATCATCTCTAGTGACATCCATCAAGTTGCCCAAACCAACAAGCCTAAAGCCACACTATCTCATCCTTCTTTGATATGCTTCTTATGTGAGCGAGCAGGTGTAGGAATCCCTTGGGATGAGCCTACTGCGACAATTCCTCGCCCCATCACCGCCGCATGGATAGATTCTCGGCTTGATGGGCCAATGggagcaccaccacagccacaggagcaacagccacagccacagccacaacagGAGCAGGAGCAGCATGCTCAGGAGGACCAGCCACCGGCACCCTCTTCCCTTGATCAGTGTCTGATGCTGCTCGTGCAGACACAGACACAACTTAGCCAAGACATTCATCGCCTAGTTACAGAGGCAAGGGTTCAGTCAAGAGGCACAAATGCATTATGCCGCCTCCTGGCTCTTCAGTTTCGTAGCCAGCAACAGCAGGAGTTACTCAAGCCTCAAGGCCAGCTGACAGAGGCAGACATTCTTCAGATGGTAGGCTTAGAGAAGCCTGCAAAACCATCCTCTTGGCATCCAGCAAAGGTACCGACCGCGGATGGAGCTGGAGAGGATCTCCAGGATGAGGACCTGATCTACCCTTCCTCTTCCCAGCCAATCTGA 1896 0.4346 MTKLKKKHPLPSEILFFKIISEASLQDGKLIPNKFTREYGVNLSNPVFLKPPDGIEWKIFWTKHDGDIWFQKGWKEFATYYSLSHKYLVLFKYQETSHLEVHIFDQSALEVDYPFCGIKIEHENLDHVSNDSVEVSDDSIEVLDELTPSQKKTRLKSTSCSRPRKKLNTGPSEVFEESSNLPQHVQIKGEQSQGTNLGMSSDKQVLDGMAPEQPPAKRQKKDQSSSQSAHRTEYPTKFRTVTHEQRYETEIKMRNFIPEKNFKLKPGEYDEIQKVITWRKWEKLCSFAQNFHPQIVREFYANAYGIEGDTTPLHTSWVRGKMVSYEEETINSFFGTQAAADCSYKAGGDLVKDYGEMKKLLARPGAIWIGKKVKPRCLRSIDLYPVVHAWSSWMHHTVLPCANESNVTVVRSQFLIATILNEPLDIGRIISSDIHQVAQTNKPKATLSHPSLICFLCERAGVGIPWDEPTATIPRPITAAWIDSRLDGPMGAPPQPQEQQPQPQPQQEQEQHAQEDQPPAPSSLDQCLMLLVQTQTQLSQDIHRLVTEARVQSRGTNALCRLLALQFRSQQQQELLKPQGQLTEADILQMVGLEKPAKPSSWHPAKVPTADGAGEDLQDEDLIYPSSSQPI 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01112 631 MobiDBLite consensus disorder prediction 151 235 - -
Gma09g01112 631 PANTHER B3 DOMAIN-CONTAINING 12 260 - -
Gma09g01112 631 MobiDBLite consensus disorder prediction 502 523 - -
Gma09g01112 631 Gene3D - 11 108 IPR015300 -
Gma09g01112 631 Pfam Putative plant transposon protein 278 462 IPR046796 -
Gma09g01112 631 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 12 260 - -
Gma09g01112 631 CDD B3_DNA 15 105 IPR003340 GO:0003677
Gma09g01112 631 MobiDBLite consensus disorder prediction 596 631 - -
Gma09g01112 631 ProSiteProfiles B3 DNA-binding domain profile. 14 107 IPR003340 GO:0003677
Gma09g01112 631 SUPERFAMILY DNA-binding pseudobarrel domain 13 107 IPR015300 -
Gma09g01112 631 Pfam B3 DNA binding domain 16 106 IPR003340 GO:0003677
Gma09g01112 631 SMART B3_2 16 107 IPR003340 GO:0003677
Gma09g01112 631 MobiDBLite consensus disorder prediction 484 523 - -
Gma09g01112 631 MobiDBLite consensus disorder prediction 152 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01112 Gma-Chr9 28902365 28905702 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01112 15 262 B3 DNA Binding Superfamily AT3G18990 28.235 1.23e-19 89.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Gma09g01112 B3 8.3e-11 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01112 - - lang:109359484 206.068