LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma09g01106	ATGACAATCTTAAGGCGATTTGGTCCTCCATTGCAATGGAAAATTGAAATCCTGAACCCTGGTATTGGTGGAAAAGGCGTTGTTCAAGCATGTCTCTACATTAGGGCTTTAATTTGCAACGCTGCTGCTGGTGCCTCTGCTGGGGCAATAGCGGCTACATTTGTGTGCCCATTGGATGTGATCAAGACTAGGCTACAAGTTCATGGCCTTCCTCATGGGCAGAAAGGTAGTGTCATTATCACAAGCTTGCAAAATATAGTAAGGAATGAAGGTTTCAGGGGAATGTACCGTGGCCTTTCACCAACAATAGTGGCATTACTTCCAAACTGGGCAGTTTATTTCACAAGTTATGAGCAACTAAAGGGTCTTCTTCGTTCACGTGATGGTTGCGATGAACTCACAACTATTGGAAATATTATAGCTGCTGCTGGTGCTGGTGCAGCCACTGCAATTTCTACAAATCCATTGTGGGTTGTTAAGACAAGACTTCAAACACAAGGAATGAGGCCTGATGTTGTTCCTTACAAGAGTGTTCTTTCTGCTTTGACAAGGATTACACATGAGGAAGGCATACGAGGCTTATATAGTGGCATTGTTCCTTCATTGGCTGGCGTAAGTCATGTTGCAATTCAATTTCCAGCATATGAAAAGATCAAGTCATACATGGCAGAAAAAGACAACACAACCGTTGACAAGCTAACTCCTGGGAGTGTTGCCATTGCATCATCAATTTCAAAAGTATTTGCCTCTGTAATGACTTATCCACATGAGGTAATACGATCCCGGCTGCAAGAGCAAGGCCAGGCCAAAAATATTGGGGTCCAGTATACAGGGGTTATTGACTGTACTAAGAAGGTGTTTCAAAAGGAAGGCATTCCAGGCTTTTATCGCGGTTGCGCGACCAATCTATTAAGAACAACTCCATCTGCAGTTATTACATTCACTAGTTATGAGATGATACACAGGTTTTTGGAGCGGGTTGTACCTCAGGACAGAGGGTATCCGCATGGCCGTTCTAAAGCCAATGCAGTTAACAAGCCCCAGCCAAAAGCCAGTGGCAGTGACAGTGACGCAGATAGGCGGCAACCACCATCTCAGTCTAACACTAAAGCTTCATCAATTCCTCATGAAAACAAAGAGCAGCTAAAAAGACATTGA	1158	0.4387	MTILRRFGPPLQWKIEILNPGIGGKGVVQACLYIRALICNAAAGASAGAIAATFVCPLDVIKTRLQVHGLPHGQKGSVIITSLQNIVRNEGFRGMYRGLSPTIVALLPNWAVYFTSYEQLKGLLRSRDGCDELTTIGNIIAAAGAGAATAISTNPLWVVKTRLQTQGMRPDVVPYKSVLSALTRITHEEGIRGLYSGIVPSLAGVSHVAIQFPAYEKIKSYMAEKDNTTVDKLTPGSVAIASSISKVFASVMTYPHEVIRSRLQEQGQAKNIGVQYTGVIDCTKKVFQKEGIPGFYRGCATNLLRTTPSAVITFTSYEMIHRFLERVVPQDRGYPHGRSKANAVNKPQPKASGSDSDADRRQPPSQSNTKASSIPHENKEQLKRH	385

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma09g01106	385	Pfam	Mitochondrial carrier protein	133	224	IPR018108	-
	Gma09g01106	385	Pfam	Mitochondrial carrier protein	234	325	IPR018108	-
	Gma09g01106	385	Pfam	Mitochondrial carrier protein	40	125	IPR018108	-
	Gma09g01106	385	MobiDBLite	consensus disorder prediction	331	385	-	-
	Gma09g01106	385	ProSiteProfiles	Solute carrier (Solcar) repeat profile.	233	323	IPR018108	-
	Gma09g01106	385	Gene3D	Mitochondrial carrier domain	132	332	IPR023395	-
	Gma09g01106	385	Gene3D	Mitochondrial carrier domain	30	131	IPR023395	-
	Gma09g01106	385	PANTHER	BNAA09G28490D PROTEIN	34	340	-	-
	Gma09g01106	385	ProSiteProfiles	Solute carrier (Solcar) repeat profile.	133	221	IPR018108	-
	Gma09g01106	385	PANTHER	MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED	34	340	IPR044712	GO:0006862\|GO:0055085
	Gma09g01106	385	PRINTS	Mitochondrial carrier protein signature	53	67	IPR002067	GO:0055085
	Gma09g01106	385	PRINTS	Mitochondrial carrier protein signature	98	118	IPR002067	GO:0055085
	Gma09g01106	385	PRINTS	Mitochondrial carrier protein signature	40	53	IPR002067	GO:0055085
	Gma09g01106	385	PRINTS	Mitochondrial carrier protein signature	148	166	IPR002067	GO:0055085
	Gma09g01106	385	PRINTS	Mitochondrial carrier protein signature	242	264	IPR002067	GO:0055085
	Gma09g01106	385	MobiDBLite	consensus disorder prediction	345	375	-	-
	Gma09g01106	385	SUPERFAMILY	Mitochondrial carrier	39	319	IPR023395	-
	Gma09g01106	385	ProSiteProfiles	Solute carrier (Solcar) repeat profile.	35	123	IPR018108	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma09g01106	Gma-Chr9	28317080	28327234	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma09g01106	53	376	Chloroplast and Mitochondria Gene Families	AT1G25380	66.463	1.04e-149	426

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma09g01106	K15115		-	gmx:100816376	691.804