Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01105 ATGCTGGAAATCTCAACTTCACATGAAACCCCTCTAGAGAACGCGGACGGCGGCTCCGCGGCGGTCTCGGACGGGTCGAAAGCCGAGCACGGCGAGGACGATGACCGGAATCCCGCCGCGAACCGGTGGCCGAGAGAGGAGACAATGGCTTTGCTCAAGATAAGGTCCGAAATGGACGTTGCTTTCAAAGACGCAAACCTCAAAGCCCCTCTCTGGGAACAAGTCTCAAGGAAATTATCGGAGCTAGGTTATAATAGGAGTGCGAAGAAGTGCAAGGAGAAATTCGAGAACATTTACAAGTACCATAGGAGAACTAAAGAAGGTCGTTTTGGAAAATCAAACGGTGCAAAAACTTACCGATTTTTCGAGCAATTGGAAGCTTTAGACGGAAACCACTCACTTCTTCCTCCGACAACAACCGTTGGTGATGATGTTGTCCTGAACGCGGTTCCGTGTTCGGTTAGTGCGGCGGCGCACGAGCATTCGAGTTCGACGACGTCGTGTTCGGGGAAGAAGAAGAGGAAGCTGACGCAGTTTCTGGAGGGGTTGATGAGGGAAGTGATAGAGAAGCAAGAGACGCTGCAGAGGAAGTTTGTGGAAGTGTTGGACAAGTGTGAAAAAGATCGAATGGCGAGGGAGGAAGCGTGGAAGAAGGAGGAGCTCGAAAGGATCAAGAAAGAACGCGAGCTTCTGGCTCAGGAAAGATCAATTGCTGCTGCCAAAGACGAAGTTGTTCTTGCTTTTCTTAGAAAGTTTGCAGAAGCAGAAGGCACGGTGCAGTTACTCGAGAAAATTCAGGTTCAAAACGACAAACAGAAAAACATGAAACAAAATGGCGGTAATGATAATGCTAATGGAGGTGGTGGTGTCACAGTTGTCACTGATATGGATAAACAAGAATGTGGAAATACTAATGTTCGTGTTAGTGTTGGGAATTTTGTGCACATGAGTAGTTCTCGTTGGCCGAAGGATGAAGTGGAGGCATTGATAAGGTTAAGGACTCAAATTGATGTGCAGGCACAATGGAATAATAATAACAATAACAATGATGGGTCTAAAGGGCCTCTTTGGGAGGAGATATCTTCGGCTATGAAGAGCCTTGGTTATGATCGAAGTGCAAAGAGGTGTAAAGAGAAATGGGAGAACATAAACAAATACTTCAAGAGGATAAAGGAGAAGAGCAAGAGGAAGCCTCAGGATTCCAAGACGTGTCCTTATTATCACCACCTTGAGGCTTTGTACAGTAAGAAGCCTAAGAAGGTGGATCATGGGAACGAGTTGAAGCCTGAGGAGCTGTTGATGCATATCATGGTGAGTCAAAGTCAAGAACAGCAACAAGAGATGCAGACTCAGACTCAGTCACCATCTGAAGATGCTGAGAGAGATCAGAATCAGGGAGATAATGAAGATCAAAGTGAGTATCAGACTCAGATGGTTGATAATAATAGTCCTTCCATTGCAATTATGAGTTAA 1473 0.4596 MLEISTSHETPLENADGGSAAVSDGSKAEHGEDDDRNPAANRWPREETMALLKIRSEMDVAFKDANLKAPLWEQVSRKLSELGYNRSAKKCKEKFENIYKYHRRTKEGRFGKSNGAKTYRFFEQLEALDGNHSLLPPTTTVGDDVVLNAVPCSVSAAAHEHSSSTTSCSGKKKRKLTQFLEGLMREVIEKQETLQRKFVEVLDKCEKDRMAREEAWKKEELERIKKERELLAQERSIAAAKDEVVLAFLRKFAEAEGTVQLLEKIQVQNDKQKNMKQNGGNDNANGGGGVTVVTDMDKQECGNTNVRVSVGNFVHMSSSRWPKDEVEALIRLRTQIDVQAQWNNNNNNNDGSKGPLWEEISSAMKSLGYDRSAKRCKEKWENINKYFKRIKEKSKRKPQDSKTCPYYHHLEALYSKKPKKVDHGNELKPEELLMHIMVSQSQEQQQEMQTQTQSPSEDAERDQNQGDNEDQSEYQTQMVDNNSPSIAIMS 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01105 490 Coils Coil 221 243 - -
Gma09g01105 490 Gene3D - 43 104 - -
Gma09g01105 490 Gene3D - 321 389 - -
Gma09g01105 490 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-2-LIKE 1 488 - -
Gma09g01105 490 MobiDBLite consensus disorder prediction 26 44 - -
Gma09g01105 490 MobiDBLite consensus disorder prediction 440 490 - -
Gma09g01105 490 CDD GT1 41 106 - -
Gma09g01105 490 CDD GT1 319 391 - -
Gma09g01105 490 MobiDBLite consensus disorder prediction 469 490 - -
Gma09g01105 490 Pfam Myb/SANT-like DNA-binding domain 319 413 IPR044822 -
Gma09g01105 490 Pfam Myb/SANT-like DNA-binding domain 41 128 IPR044822 -
Gma09g01105 490 ProSiteProfiles Myb-like domain profile. 319 384 IPR001005 -
Gma09g01105 490 PANTHER - 1 488 - -
Gma09g01105 490 MobiDBLite consensus disorder prediction 1 44 - -
Gma09g01105 490 ProSiteProfiles Myb-like domain profile. 35 99 IPR001005 -
Gma09g01105 490 SMART sant 39 101 IPR001005 -
Gma09g01105 490 SMART sant 317 386 IPR001005 -
Gma09g01105 490 MobiDBLite consensus disorder prediction 440 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01105 Gma-Chr9 28266190 28268542 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01105 316 429 Trihelix Transcription Factor Family AT1G76880 39.130 3.19e-16 79.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gma09g01105 Myb_DNA-bind_4 3.6e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01105 - - gmx:100787329 903.664