Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01101 ATGCCCAATAAAAAGGATACCGATGGGTATCATGGGTGTCCAAAAAATTCCTTCCCAGTTAGTATTAACTTCAACCGCCTGTATATTAAAGCCCACTCTTGCAGCAAGGAACCACAACCAAACCTTGTCCCCATGGAGGCGCAGCCCACTCCTCCACCTGACCCGGTGGATTCCTCCCCACACTCCTGGGACGAGCCCTGTCCTCCTCTGAGCTCCGCCAAACTCCGGCTGATGTGCAGCTACGGCGGCCACATCGTGCCCCGCCCCCACGACAAGTCACTCTGCTACGTCGGCGGCGACACCCGAATCGTCGTCGTCCCCCGCCACGTCACTCTCTCGGAGCTCTCCACGCGCCTCTCGAAGTCGTTCCTCCACGCGCGCCCCTTCGTGCTTAAGTACCAGCTCCCCAGCGAGGACCTCGACTCCCTCGTCTCCGTCACCACTGACGAAGACCTCGAGAACATGATCGATGAGTACGATCACCGCTCCGGAAACAATAACAATAATAAACCTTCTTCACGAATTCGCCTCTTTCTTTTTCCGTCCCAGCCCGACTCGGTCCACGGGCCCGCGGGCTTGGGCTCTGTCAAGTCCGAGGAGTGGCTCAGTGGGTCCCTTGACGGAGGCTTATCTGAGTCCGCCTCCGTCAATTGCATCCTCGGACTCGACGACGAGGTTGCTTCTGCTTCTGCTGCAGCGAACAGCAATGGTAACAGTGGGAAAGTTTTCAAGGATGTGGTGTCGGATTCGCCTATGCTTGAGAGCAATTCGTCTTTCGGTTCTGGTTCCTCTGTGCCGCCGAATTTGCCGCCGATAAAGGTTCACGTGGAGATTGAGGAACAGTTTGCTCAGTTGGGGGTGGGACAGAAGCAACAAGAAGATGAAGGTTTTGTTGCGCCGGTGCCGGTGATGGAATTTTCCACGAACCGCCTTGTCTCCGATGACGAGAGATCCGATCATGGGGTCCCTCTTGGGCATAGAAAATCGCCAACCCCGCCGCTACAGCCTCAGCCTCACCAATTTCAACAGAAATCACCTCATGGTGTTGTTGATTTGCCTTCCCCTGATTCACTTTCAAGTGATAGTAGTCTTTCAAATGCAATGTTGCGCCCGAAACCAGCCATTTATCAAGACCAAGTTCAAATTCAATATGGAAGTTCTCAGGTTCCTAGCAATGCCTCGGTTGATCCAAAGCTTAATGTGACTGATCAACAAGGTTGGATTCAGATgcagcagcatgtgcaggaagctggatatgttttgcagccacaatttgatcaactgccactgccgcagcagcatcagactcagccgccgcagcagcagcatcaaccacagcagtaTATCCACAACACACATTTAATTCACCATACCCTTTCAGGGTCTGTGCCAATCCCCGCCTCATACTATCCTGTATGTCAGCAACAACTCCATACCCAACATCTCCATCACCTTGATCAACAATACCCGGTTTACTATGTGCAGGCAAGACAGGCCCAACCATACAACTTGTCAGTGCAGCTGGCTAATGCAGCTGAATCTGCCACAACTATGCCTTCTAGCCAGTCCCAAAATCAACCAAGTTCTGCTGCTTACAACTCAACAAGAAATCCTAATTTTGAAATGGCAGCAGGTGCATGTAGAACCGCACCTGCCACCCCTCAATTGGTTCAAGTTTCTTCTAGTAAGCATCAACAGCAATATGTTGCTCACTCTCAAATTTATCATCGCCATCCTCAATCAATGCCTCCTAAGTCTGCAGTACCTGCAAATTATGCTTACAACTATGCAGATCCTGCACTTGCTCAAGTGTTTTATAGTCAACCTTTGGCACCCTTCATGCCTTCACACTACCAGACCATGACAGCTGCTTCTGTAATGCGGACGGAAGTTTCTGCTAAGCTTCCCTCCGACAGCATGAAGAAGCCGCAGCAGGTGACAACCTCGCAGCCATTGTGA 1959 0.4839 MPNKKDTDGYHGCPKNSFPVSINFNRLYIKAHSCSKEPQPNLVPMEAQPTPPPDPVDSSPHSWDEPCPPLSSAKLRLMCSYGGHIVPRPHDKSLCYVGGDTRIVVVPRHVTLSELSTRLSKSFLHARPFVLKYQLPSEDLDSLVSVTTDEDLENMIDEYDHRSGNNNNNKPSSRIRLFLFPSQPDSVHGPAGLGSVKSEEWLSGSLDGGLSESASVNCILGLDDEVASASAAANSNGNSGKVFKDVVSDSPMLESNSSFGSGSSVPPNLPPIKVHVEIEEQFAQLGVGQKQQEDEGFVAPVPVMEFSTNRLVSDDERSDHGVPLGHRKSPTPPLQPQPHQFQQKSPHGVVDLPSPDSLSSDSSLSNAMLRPKPAIYQDQVQIQYGSSQVPSNASVDPKLNVTDQQGWIQMQQHVQEAGYVLQPQFDQLPLPQQHQTQPPQQQHQPQQYIHNTHLIHHTLSGSVPIPASYYPVCQQQLHTQHLHHLDQQYPVYYVQARQAQPYNLSVQLANAAESATTMPSSQSQNQPSSAAYNSTRNPNFEMAAGACRTAPATPQLVQVSSSKHQQQYVAHSQIYHRHPQSMPPKSAVPANYAYNYADPALAQVFYSQPLAPFMPSHYQTMTAASVMRTEVSAKLPSDSMKKPQQVTTSQPL 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01101 652 MobiDBLite consensus disorder prediction 310 324 - -
Gma09g01101 652 MobiDBLite consensus disorder prediction 515 534 - -
Gma09g01101 652 CDD PB1_UP2 78 180 - -
Gma09g01101 652 MobiDBLite consensus disorder prediction 38 65 - -
Gma09g01101 652 Pfam PB1 domain 90 181 IPR000270 GO:0005515
Gma09g01101 652 Gene3D - 94 181 - -
Gma09g01101 652 MobiDBLite consensus disorder prediction 633 652 - -
Gma09g01101 652 MobiDBLite consensus disorder prediction 44 59 - -
Gma09g01101 652 MobiDBLite consensus disorder prediction 638 652 - -
Gma09g01101 652 PANTHER OS05G0427100 PROTEIN-RELATED 47 641 - -
Gma09g01101 652 SUPERFAMILY CAD & PB1 domains 90 188 - -
Gma09g01101 652 PANTHER EXPRESSED PROTEIN 47 641 - -
Gma09g01101 652 MobiDBLite consensus disorder prediction 309 365 - -
Gma09g01101 652 SMART PB1_new 89 182 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01101 Gma-Chr9 26895750 26898819 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01101 74 236 MAP Kinase Kinase Kinase AT3G46920 38.037 1.24e-25 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01101 - - gmx:100805172 1172.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00879 07 9497364 9499950 Gma09g01101 09 26895750 26898819 GST