Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01048 ATGCCTTTCAAGAGGTATGTTGAGATCGGGAGGGTTGCCCAAATCAACTACGACAAGGAATATGGCAGGCTCGTCGTCATTGTCGATGTCATTGACCAGAACAGAGCTCTTGTCGATGCCCCTGATATGGTGAGGTCCCAAGTCAATTTCAAAAGGCTTTCCCTAACCGACATTAAGATTGACATTAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGTTAAGAGTTCATGGGGCAGGAAACTCATTGTCAGAAAGAGAAGGGCATCCCTCAATGATTTTGATAGGTTCAAGATAATGTTGGCCAAGATCAAGTTAAAGCTTGATTGGGGATAG 348 0.4425 MPFKRYVEIGRVAQINYDKEYGRLVVIVDVIDQNRALVDAPDMVRSQVNFKRLSLTDIKIDIKRVPKKKDLVKAMEDVKSSWGRKLIVRKRRASLNDFDRFKIMLAKIKLKLDWG 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01048 115 PANTHER RIBOSOMAL PROTEIN L14, PUTATIVE-RELATED 1 109 - -
Gma09g01048 115 SUPERFAMILY Translation proteins SH3-like domain 5 79 IPR008991 -
Gma09g01048 115 Pfam Ribosomal protein L14 45 109 IPR002784 GO:0003735|GO:0005840|GO:0006412
Gma09g01048 115 PANTHER 60S RIBOSOMAL PROTEIN L14 1 109 IPR039660 GO:0003723|GO:0003735
Gma09g01048 115 Gene3D - 1 82 IPR014722 -
Gma09g01048 115 Gene3D - 85 111 - -
Gma09g01048 115 CDD KOW_RPL14 7 79 IPR041985 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01048 Gma-Chr9 21685336 21686283 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01048 1 109 Cytoplasmic Ribosomal Protein Gene Family AT4G27090 75.862 5.24e-56 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01048 K02875 - gmx:100499889 202.601